Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC040168.1-201ENST00000623594 991 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 SCN1A-220ENST00000641603 12506 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 RNU1-44P-201ENST00000384453 163 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AL121834.1-202ENST00000404494 277 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC127526.1-201ENST00000417526 366 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 ISCA1P6-201ENST00000427740 390 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC133104.1-201ENST00000429100 218 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 MTATP6P30-201ENST00000443540 664 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 snoU13.3-201ENST00000459441 104 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC108751.2-201ENST00000469993 231 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC023598.1-201ENST00000472521 361 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC055855.1-201ENST00000489563 579 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC108022.1-201ENST00000493466 478 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 SAP18P1-201ENST00000512058 390 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AF186190.1-201ENST00000517470 480 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC123904.2-201ENST00000548059 300 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AL845331.3-202ENST00000562856 261 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AL606834.2-201ENST00000602954 668 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC131238.1-201ENST00000617135 328 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC009268.2-201ENST00000621925 457 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC008785.1-201ENST00000624475 456 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC008013.2-202ENST00000637965 364 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 RLIMP1-201ENST00000339626 1680 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VTA1Q9NP79 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTA1Q9NP79 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
VTA1Q9NP79 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC024560.2-201ENST00000507981 1497 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 OR52B1P-201ENST00000316506 909 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 Y_RNA.9-201ENST00000362354 101 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 Y_RNA.493-201ENST00000384422 102 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 MIR23B-201ENST00000384832 97 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 RNU2-62P-201ENST00000410868 191 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 BX295541.1-201ENST00000417774 250 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 USP9YP15-201ENST00000442391 422 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 SNORA84-201ENST00000459229 133 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 HMGB1P25-201ENST00000468402 607 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 RNU4-60P-201ENST00000517239 135 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AP003181.2-201ENST00000528941 181 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC006064.5-201ENST00000541782 248 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC053481.4-201ENST00000583164 216 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 KC877982.1-201ENST00000602313 470 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC011816.2-201ENST00000607089 556 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 OR6R2P-201ENST00000609216 300 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AC090970.3-201ENST00000612566 866 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 MIR6875-201ENST00000617506 72 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 AL356585.4-201ENST00000623078 1229 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 MTND5P3-201ENST00000438536 1800 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms