Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MTCO2P34-201ENST00000421994 607 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC005297.2-201ENST00000450430 606 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 BX276092.4-201ENST00000452056 248 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 RPS20P32-201ENST00000456044 356 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 MTCO2P18-201ENST00000457151 658 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC022034.3-201ENST00000471393 478 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 RNF138P1-201ENST00000502765 546 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC026784.1-201ENST00000507986 352 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 MTCO3P7-201ENST00000510008 774 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AF131216.2-201ENST00000512316 564 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 MTND4LP31-201ENST00000514859 294 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC008011.1-201ENST00000545989 227 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC012213.3-201ENST00000577199 777 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC097468.3-201ENST00000607956 456 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AP000254.1-201ENST00000609934 520 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC009878.1-201ENST00000621819 340 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC025048.6-202ENST00000627667 438 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC092104.1-201ENST00000497346 1441 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 DDX43P2-201ENST00000604753 1354 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC073073.2-201ENST00000609827 2578 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 SAGE4P-201ENST00000442271 3381 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 RNU1-64P-201ENST00000365443 163 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 Y_RNA.559-201ENST00000384686 107 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 MIR153-1-201ENST00000384914 90 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL031679.1-201ENST00000400616 525 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC127526.1-201ENST00000417526 366 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC008065.1-201ENST00000428525 348 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 OR51AB1P-201ENST00000429046 620 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 MTCO3P5-201ENST00000433620 714 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 SNRPEP7-201ENST00000438350 220 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 BMI1P1-201ENST00000445879 941 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 PPIAP3-201ENST00000450588 505 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 BX322784.1-201ENST00000455793 1077 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 UBDP1-202ENST00000457888 382 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 RPL23AP62-201ENST00000463396 453 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 RPL37P6-202ENST00000464216 403 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 NIPA2P2-201ENST00000496376 1083 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL139174.1-201ENST00000531489 886 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC013828.2-201ENST00000532487 235 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AP000873.5-201ENST00000533906 236 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 MIR3611-201ENST00000584484 83 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 MIR548AB-201ENST00000584917 84 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AL009028.1-201ENST00000604895 802 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC068276.1-201ENST00000605793 379 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 RNVU1-4-201ENST00000612985 164 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC090116.1-201ENST00000615679 446 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AC025588.4-201ENST00000615802 908 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms