Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 AL731566.1-201ENST00000620490 1937 ntBASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 AP001541.1-201ENST00000623322 1904 ntBASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE3DQ9BYE3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 AP000542.2-201ENST00000623199 6179 ntBASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 AC114774.1-201ENST00000507410 1770 ntBASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 AC010615.1-201ENST00000594254 1764 ntBASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC1.65□□□□□ -2.14
LCE3DQ9BYE3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 DEFB108F-201ENST00000344638 222 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 MIR335-201ENST00000362173 94 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNU1-76P-201ENST00000362903 159 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNA5SP382-201ENST00000363355 112 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNU6-288P-201ENST00000363690 104 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNA5SP114-201ENST00000363780 113 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNU6-595P-201ENST00000363944 107 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.214-201ENST00000364201 112 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNU6-173P-201ENST00000364215 104 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNY1-201ENST00000364228 113 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP76-201ENST00000364419 323 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNA5SP302-201ENST00000364896 100 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP189-201ENST00000365042 330 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNU6-1062P-201ENST00000383908 107 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RNU6-398P-201ENST00000384143 109 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 Y_RNA.555-201ENST00000384673 110 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 MIR323B-201ENST00000385269 82 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 SNORD73A-201ENST00000386062 65 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 SNORA68.2-201ENST00000391263 128 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 SNORD58.1-201ENST00000391313 66 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RPL11P3-201ENST00000395256 523 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP236-201ENST00000410635 284 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 DPPA2P3-201ENST00000411853 655 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 STSP1-201ENST00000412493 1151 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 REREP1Y-201ENST00000422655 198 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 CYP4F34P-201ENST00000425951 481 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC092573.2-201ENST00000434546 243 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC013403.1-201ENST00000436954 263 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 REREP2Y-201ENST00000439103 200 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 SUMO1P3-201ENST00000439961 304 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AL590664.1-201ENST00000448065 339 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AL031274.1-201ENST00000450334 232 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC013470.1-201ENST00000453438 462 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC133134.1-201ENST00000466800 359 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RN7SL815P-201ENST00000470970 290 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 RN7SL338P-201ENST00000481467 293 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 OR9A1P-202ENST00000484361 945 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 AC124945.1-201ENST00000485133 188 ntBASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC1.65□□□□□ -2.15
LCE3DQ9BYE3 GM2AP2-201ENST00000491764 562 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms