Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.149-201ENST00000363558 117 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 RN7SKP160-201ENST00000363804 340 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 OR1L6-202ENST00000373684 1044 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-601P-201ENST00000384540 107 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 MT-TC-201ENST00000387405 66 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-821P-201ENST00000390995 107 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL109755.1-201ENST00000401791 649 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL133388.1-201ENST00000404509 287 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 MIR548F4-201ENST00000408515 105 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 RPL31P12-201ENST00000422587 358 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC005094.1-201ENST00000440420 368 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL031584.1-201ENST00000447169 754 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC005798.1-201ENST00000513715 387 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 FAM60DP-201ENST00000524174 632 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL133271.1-201ENST00000538229 291 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 MIR4680-201ENST00000580906 66 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC092747.3-201ENST00000603769 301 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL670379.11-201ENST00000604059 253 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL670379.10-201ENST00000604330 253 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC104662.1-201ENST00000604448 511 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL670379.12-201ENST00000605291 253 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL670379.9-201ENST00000605428 253 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL008729.2-201ENST00000606393 473 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AL691477.1-201ENST00000624398 162 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 AC004817.4-201ENST00000602396 3625 ntBASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 AC108751.5-201ENST00000492880 1336 ntBASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 LINC01963-201ENST00000562038 3148 ntBASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 AC104623.2-202ENST00000623477 4002 ntBASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 BDP1P-201ENST00000582658 1990 ntBASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM56Q9BRZ2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AL049641.1-201ENST00000441055 1948 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 MIR133B-201ENST00000362210 119 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1287P-201ENST00000362914 107 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1284P-201ENST00000363701 100 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-960P-201ENST00000364056 120 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU5E-6P-201ENST00000365574 115 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-637P-201ENST00000384050 107 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1060P-201ENST00000384664 107 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 MIR568-201ENST00000385036 95 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 MT-TG-201ENST00000387429 68 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AL360182.1-201ENST00000397433 468 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 UBE2V1P2-201ENST00000397758 440 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RN7SKP58-201ENST00000411010 305 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 POLHP1-201ENST00000411806 470 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 PSMA2P3-201ENST00000429685 675 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 MTND1P17-201ENST00000448961 204 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RN7SL189P-201ENST00000468631 289 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1137P-201ENST00000517073 99 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 IGKV2-18-201ENST00000522607 343 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AP003385.6-201ENST00000531603 374 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC138761.3-201ENST00000579993 334 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 PRPF19P1-201ENST00000584766 898 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AF038458.1-201ENST00000588406 262 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC023043.2-201ENST00000589678 1026 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC006254.3-201ENST00000603353 884 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 FO393422.1-201ENST00000603908 708 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC000068.2-201ENST00000608816 460 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 U4.1-201ENST00000620349 87 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AL357559.1-201ENST00000622228 274 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC008013.2-202ENST00000637965 364 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 AC011755.1-201ENST00000623763 2049 ntBASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms