Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC006111.3-201ENST00000622137 383 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS2Q99743 AP001002.2-201ENST00000625137 386 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
NPAS2Q99743 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
NPAS2Q99743 AC092326.2-201ENST00000624772 1561 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
NPAS2Q99743 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NPAS2Q99743 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AL136372.1-201ENST00000403060 228 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 U3.42-201ENST00000408746 214 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 LUZP4P1-201ENST00000415420 344 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 DPRXP1-201ENST00000426312 460 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 RPL21P40-201ENST00000428586 483 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS2Q99743 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 RFC5P1-201ENST00000454419 874 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 Z82190.1-201ENST00000454534 490 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 RN7SL504P-201ENST00000494496 287 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC118282.1-201ENST00000506408 765 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.08□□□□□ -1.92
NPAS2Q99743 AC008837.1-201ENST00000511513 412 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS2Q99743 SCARNA13-201ENST00000516672 275 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.08□□□□□ -1.92
NPAS2Q99743 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 AC092451.2-201ENST00000538746 658 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.08□□□□□ -1.92
NPAS2Q99743 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS2Q99743 MED28P6-201ENST00000558776 231 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 MIR5680-201ENST00000577577 84 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 BNIP3P24-201ENST00000593398 557 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC012493.2-201ENST00000595083 291 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.08□□□□□ -1.92
NPAS2Q99743 AL035411.2-201ENST00000604022 421 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC009220.3-201ENST00000604318 586 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC099785.1-201ENST00000605697 437 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AL583856.2-201ENST00000606298 543 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC009570.1-201ENST00000609599 745 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC009464.1-201ENST00000615731 469 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS2Q99743 AC253576.2-201ENST00000618815 580 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 MIR8057-201ENST00000620957 69 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 AL356585.4-201ENST00000623078 1229 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 SNORA50A-202ENST00000629536 136 ntBASIC3.08□□□□□ -1.92
NPAS2Q99743 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS2Q99743 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NPAS2Q99743 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPAS2Q99743 AC008264.2-201ENST00000610193 3731 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.07□□□□□ -1.92
NPAS2Q99743 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPAS2Q99743 RNU5D-1-201ENST00000363299 116 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 RNU6-707P-201ENST00000364647 95 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 RPS7P9-201ENST00000414704 586 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AL137014.1-201ENST00000420490 1226 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS2Q99743 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS2Q99743 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS2Q99743 AC013262.1-201ENST00000426710 252 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 MTATP6P4-201ENST00000427725 675 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 EZH2P1-201ENST00000431167 291 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 CYCSP32-201ENST00000440548 321 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS2Q99743 VN1R10P-201ENST00000447106 875 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS2Q99743 USP9YP34-201ENST00000453983 808 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NPAS2Q99743 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.07□□□□□ -1.92
NPAS2Q99743 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.07□□□□□ -1.92
NPAS2Q99743 SNORA31.1-201ENST00000515993 133 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 SNORA31.5-201ENST00000516190 133 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AP001804.3-201ENST00000525146 880 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 MTCO3P15-201ENST00000526563 574 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AP001189.2-201ENST00000527320 189 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AP003066.2-201ENST00000529375 555 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS2Q99743 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS2Q99743 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS2Q99743 SETP7-201ENST00000552169 453 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.07□□□□□ -1.92
NPAS2Q99743 AP001521.1-201ENST00000609150 300 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AC010975.3-201ENST00000618727 978 ntBASIC3.07□□□□□ -1.92
NPAS2Q99743 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms