Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.49□□□□□ -1.85
PDLIM5Q96HC4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PDLIM5Q96HC4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDLIM5Q96HC4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDLIM5Q96HC4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.49□□□□□ -1.85
PDLIM5Q96HC4 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
PDLIM5Q96HC4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 SNORD9-201ENST00000362566 104 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 Y_RNA.192-201ENST00000363977 102 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 SNORA57.1-201ENST00000391227 145 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 RN7SKP159-201ENST00000410657 292 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 NIPA2P1-201ENST00000426223 976 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AL158071.1-201ENST00000430315 461 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AL050321.1-201ENST00000432363 400 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 RN7SL330P-201ENST00000469709 307 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 HMGN2P13-201ENST00000476476 274 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 TMEM251P1-201ENST00000503717 318 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC103783.1-201ENST00000520506 373 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 PDCL2P2-201ENST00000533651 189 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC010198.2-201ENST00000550612 259 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC084824.1-201ENST00000550917 1005 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AL354943.1-201ENST00000572103 781 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC090615.1-201ENST00000577519 154 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 MIR5047-201ENST00000579212 100 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC021171.1-201ENST00000603137 706 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC009220.3-201ENST00000604318 586 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC106900.2-201ENST00000604994 317 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC080013.3-201ENST00000606839 578 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 TUSC7.1-201ENST00000610969 165 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC110801.1-201ENST00000623590 212 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AL079343.1-201ENST00000572358 1771 ntBASIC3.48□□□□□ -1.85
PDLIM5Q96HC4 AC005539.1-201ENST00000443768 1479 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC104454.1-201ENST00000421341 1401 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 RNU4-40P-201ENST00000364351 143 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 RNU6-882P-201ENST00000391025 103 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 HMGB1P17-201ENST00000403495 628 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 TIMM9P2-201ENST00000419324 266 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AP000907.1-201ENST00000428428 510 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 SDCBPP1-201ENST00000440192 890 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 RPL23AP76-201ENST00000441860 458 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 Z83846.1-201ENST00000446798 265 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 OR6K5P-201ENST00000447050 945 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 HMGB3P8-201ENST00000449709 577 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 ARPC3P2-201ENST00000457786 533 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC010486.2-201ENST00000505572 483 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 HMGN1P11-201ENST00000508668 303 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 SNORA3.4-201ENST00000515969 96 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC007834.2-201ENST00000536310 343 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 OSBPL9P5-201ENST00000542581 171 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 TGIF1P1-201ENST00000558095 802 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC055876.1-202ENST00000567053 138 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC008088.1-201ENST00000580993 280 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC013444.2-201ENST00000603317 787 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms