Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HLA-CQ95604 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-CQ95604 ZNF402P-201ENST00000404435 3100 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 RNU6-1266P-201ENST00000362794 105 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 Y_RNA.269-201ENST00000364685 89 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 Y_RNA.533-201ENST00000384596 114 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 MT-TC-201ENST00000387405 66 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 RPS29P13-201ENST00000402041 169 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 MTCYBP2-201ENST00000407745 171 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AL713922.1-201ENST00000416477 747 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-CQ95604 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 HMGB1P27-201ENST00000431429 603 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 CYCSP6-201ENST00000434498 302 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-CQ95604 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 AL360271.2-201ENST00000447710 161 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-CQ95604 RNU6-1037P-201ENST00000459571 107 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.12□□□□□ -1.43
HLA-CQ95604 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-CQ95604 AC098869.1-201ENST00000481627 292 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.12□□□□□ -1.43
HLA-CQ95604 RNU6-1338P-201ENST00000516328 91 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-CQ95604 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 AC007842.1-201ENST00000597336 2039 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AP000787.2-201ENST00000604432 568 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 AC126915.2-201ENST00000610957 190 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 AL445647.2-201ENST00000615170 130 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-CQ95604 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HLA-CQ95604 AL136531.3-201ENST00000624378 3658 ntBASIC6.12□□□□□ -1.43
HLA-CQ95604 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HLA-CQ95604 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-CQ95604 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-CQ95604 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-CQ95604 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-CQ95604 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 BTBD10P1-201ENST00000549824 1352 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 snoU2_19.2-201ENST00000363024 80 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 U3.13-201ENST00000364804 214 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 Y_RNA.458-201ENST00000384240 102 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 RNU6-1140P-201ENST00000410517 106 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 RNU6-603P-201ENST00000411403 107 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AL353621.1-201ENST00000418219 243 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC099336.2-201ENST00000422457 254 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 ELOCP18-201ENST00000434209 337 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AC004866.2-201ENST00000438285 481 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-CQ95604 BX276092.4-201ENST00000452056 248 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC099560.2-201ENST00000457554 255 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 RPS27AP13-201ENST00000498403 237 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AC008716.1-201ENST00000511084 513 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AC074250.1-201ENST00000511117 192 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 MIR4480-201ENST00000582492 71 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC010620.2-201ENST00000600135 313 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
HLA-CQ95604 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HLA-CQ95604 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-CQ95604 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC133552.1-201ENST00000569988 4007 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 LINC02555-201ENST00000563933 1951 ntBASIC6.11□□□□□ -1.43
HLA-CQ95604 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-CQ95604 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-CQ95604 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
HLA-CQ95604 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-CQ95604 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HLA-CQ95604 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms