Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL158071.1-201ENST00000430315 461 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC006484.1-201ENST00000435086 1884 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC009963.2-201ENST00000453431 138 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC018437.1-201ENST00000492214 406 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 TOMM22P4-201ENST00000511318 336 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 RNU6-388P-201ENST00000517012 105 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 RNU6-389P-201ENST00000517048 105 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC026826.3-201ENST00000561747 158 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC060780.2-201ENST00000589047 198 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 MIR6862-1-201ENST00000613016 70 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 MIR6862-2-201ENST00000614755 70 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AC093535.2-201ENST00000624769 2326 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 AL022311.1-201ENST00000623726 19416 ntBASIC5.61□□□□□ -1.51
DEPDC4Q8N2C3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 MTND5P27-201ENST00000428871 1720 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 SNORA43.1-201ENST00000364863 140 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AL445529.1-201ENST00000398713 389 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 SNORA77.2-201ENST00000408571 112 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RNU2-3P-201ENST00000410144 191 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RNA5SP178-201ENST00000410380 128 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RNU4-34P-201ENST00000410431 124 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC063979.1-201ENST00000415539 377 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RPL12P12-201ENST00000424633 501 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC093414.1-201ENST00000434712 514 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RPS24P13-201ENST00000442520 397 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RN7SL717P-201ENST00000478343 297 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RPL23AP40-201ENST00000487630 390 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC114801.2-201ENST00000503825 781 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC090958.1-201ENST00000511122 351 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC114781.3-201ENST00000512083 142 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 APOOP4-201ENST00000513530 597 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RNA5SP418-201ENST00000515951 117 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RNU2-53P-201ENST00000516257 147 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.715-201ENST00000517082 110 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 IGHV4-55-201ENST00000520889 368 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC104576.1-201ENST00000524225 88 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC005332.4-201ENST00000592752 579 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC073046.2-201ENST00000604756 527 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 HMGB1P24-202ENST00000615653 685 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 AC009812.4-201ENST00000569134 1805 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.6□□□□□ -1.51
DEPDC4Q8N2C3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 AC093591.2-201ENST00000565254 3843 ntBASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 AL353796.1-201ENST00000561542 3241 ntBASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.210-201ENST00000364161 110 ntBASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.288-201ENST00000364854 92 ntBASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 RNA5SP77-201ENST00000365394 120 ntBASIC5.59□□□□□ -1.51
DEPDC4Q8N2C3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms