Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 AL161756.3-201ENST00000641216 2071 ntBASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 AC068870.1-201ENST00000563737 2455 ntBASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
SCUBE3Q8IX30 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCUBE3Q8IX30 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCUBE3Q8IX30 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCUBE3Q8IX30 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
SCUBE3Q8IX30 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 ZNF299P-201ENST00000406845 1804 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 RNU6-1020P-201ENST00000363684 107 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 RNU6-933P-201ENST00000384424 107 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 U3.29-201ENST00000391296 212 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 RNU6-325P-201ENST00000411132 105 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC092809.3-201ENST00000415453 231 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 PTMAP6-201ENST00000439110 327 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 TPT1P13-201ENST00000449760 499 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 snoU13.7-201ENST00000459220 104 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 RPS4XP20-201ENST00000505751 772 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 TOMM22P4-201ENST00000511318 336 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 SCARNA18.1-201ENST00000516330 83 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 MIR2117-201ENST00000516780 80 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 RNU6-677P-201ENST00000516914 101 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 MTND5P41-201ENST00000517498 206 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC091144.1-201ENST00000519573 138 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 RPL21P7-201ENST00000557463 483 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 MIR3144-201ENST00000579460 79 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 MIR3176-201ENST00000582210 90 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC007566.2-201ENST00000603642 413 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 MIR3976-201ENST00000606807 139 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 U6.106-201ENST00000636360 105 ntBASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.21□□□□□ -1.42
SCUBE3Q8IX30 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 PANDAR-201ENST00000629595 1506 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 Y_RNA.8-201ENST00000362353 102 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 SNORD1C-201ENST00000363315 78 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 Y_RNA.581-201ENST00000391017 97 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC016739.1-201ENST00000405359 345 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AL031736.2-201ENST00000426573 787 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AL159987.2-201ENST00000432754 307 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AP000936.3-201ENST00000438127 255 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 HLA-DPA3-207ENST00000454398 229 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 COX6CP14-201ENST00000469580 174 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 HMGN2P13-201ENST00000476476 274 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 MRPL42P6-201ENST00000486397 371 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC113155.1-201ENST00000511141 769 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC114781.3-201ENST00000512083 142 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 OR7E18P-201ENST00000592589 702 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 MIR6730-201ENST00000622213 67 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 AC243829.7-201ENST00000633081 225 ntBASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCUBE3Q8IX30 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms