Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 OR8K4P-201ENST00000534608 872 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC125611.2-201ENST00000551907 647 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AL121603.1-201ENST00000553815 142 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 GTF2IP8-201ENST00000560687 584 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC023824.3-201ENST00000569003 562 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC024153.1-201ENST00000603103 365 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC098483.2-201ENST00000603158 454 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 DPRXP5-201ENST00000604662 539 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC005000.2-201ENST00000605468 310 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC026741.1-201ENST00000605892 482 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC016542.1-201ENST00000608259 493 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 AC092650.2-201ENST00000619984 902 ntBASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.89□□□□□ -1.95
CDKL3Q8IVW4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 MTCO1P4-201ENST00000520516 1409 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 Y_RNA.110-201ENST00000363220 99 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 SNORA48.5-201ENST00000391143 135 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 MTCO3P12-201ENST00000416718 547 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 RPL21P32-201ENST00000419877 477 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 RPS6P14-201ENST00000425165 719 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL390023.1-201ENST00000428836 262 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC112653.1-201ENST00000443851 386 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC005002.1-201ENST00000447458 540 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL096803.2-201ENST00000450032 677 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 HMGN3P1-201ENST00000453847 193 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC026412.2-201ENST00000512270 1075 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 RN7SL622P-201ENST00000585292 275 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 VN1R92P-201ENST00000598511 928 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL355812.1-201ENST00000603215 216 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 RPL23AP88-201ENST00000605759 454 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL513477.2-201ENST00000607858 568 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC021851.1-201ENST00000608537 1082 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC069234.5-201ENST00000611056 416 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 AC007275.1-201ENST00000621243 671 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 ASNSP3-201ENST00000451989 1306 ntBASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL3Q8IVW4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 RNU1-140P-201ENST00000365040 165 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AP002784.2-201ENST00000397300 549 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC019070.1-201ENST00000415008 1024 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 PAICSP7-201ENST00000419829 962 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 UBE2D3P3-201ENST00000426992 425 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC093156.1-201ENST00000440382 670 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 HSFY3P-201ENST00000444242 1191 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AL929288.2-201ENST00000446368 407 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 RPL32P14-201ENST00000463196 378 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 RPS4XP6-201ENST00000477670 797 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 MTCO2P9-201ENST00000503214 694 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC098799.2-201ENST00000509466 868 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC011611.5-201ENST00000552477 578 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AL136520.1-202ENST00000555494 763 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC090695.1-201ENST00000561269 1222 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC011471.1-201ENST00000585766 187 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms