Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 BMS1P21-201ENST00000634565 365 ntBASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 AL732372.2-225ENST00000642124 456 ntBASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 AL365361.1-201ENST00000566942 3481 ntBASIC4.69□□□□□ -1.66
KRT28Q7Z3Y7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 ELL2P4-201ENST00000446870 1376 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 Y_RNA.77-201ENST00000362962 107 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AL031121.1-201ENST00000406553 254 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 U3.39-201ENST00000408569 239 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RPL7P8-201ENST00000411964 730 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RPL23AP39-201ENST00000415533 405 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 MTCO2P16-201ENST00000436962 677 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RPL36AP33-201ENST00000450395 310 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 ZNF114P1-201ENST00000453500 292 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RN7SL429P-201ENST00000479090 223 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RN7SL489P-201ENST00000486185 223 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RN7SL327P-201ENST00000488659 223 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 HMGB1P21-201ENST00000502313 581 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC114981.1-201ENST00000503897 678 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC109458.1-201ENST00000508858 316 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RNU6-150P-201ENST00000516237 95 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RN7SKP209-201ENST00000516888 304 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 ROCK1P1-201ENST00000573767 549 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC011260.1-201ENST00000578420 472 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 MIR4637-201ENST00000582405 84 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 RN7SL853P-201ENST00000617250 223 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 AL356596.1-201ENST00000624230 379 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.68□□□□□ -1.66
KRT28Q7Z3Y7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 MTND4P26-201ENST00000415971 1359 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AC012020.1-201ENST00000624541 1728 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 MIR422A-201ENST00000362286 90 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 RNU6-660P-201ENST00000364566 109 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 SNORA26.8-201ENST00000391306 124 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 UBE2V1P2-201ENST00000397758 440 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 EIF5P1-201ENST00000400019 1231 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 RNU2-21P-201ENST00000410368 188 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 RNU4-47P-201ENST00000410876 114 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 TPMTP3-201ENST00000411928 735 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 NPM1P11-201ENST00000417106 855 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AC083875.1-201ENST00000419509 405 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AL158071.1-201ENST00000430315 461 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 ZYG11AP1-201ENST00000430329 837 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AC068724.1-201ENST00000487100 792 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 RNA5SP216-201ENST00000516111 123 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 RN7SKP82-201ENST00000516786 223 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 AL356266.1-201ENST00000623311 483 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 U6.101-201ENST00000637707 76 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 MFSD8-233ENST00000641482 4860 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRT28Q7Z3Y7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KRT28Q7Z3Y7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.66□□□□□ -1.66
KRT28Q7Z3Y7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
KRT28Q7Z3Y7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT28Q7Z3Y7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT28Q7Z3Y7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
KRT28Q7Z3Y7 Y_RNA.201-201ENST00000364052 96 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms