Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AL356274.1-201ENST00000617064 410 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AL357559.1-201ENST00000622228 274 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 CASC19-204ENST00000641001 2055 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 SAR1AP2-201ENST00000392696 594 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 GLULP6-201ENST00000399502 913 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 HMGB3P7-201ENST00000400214 611 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 RN7SKP100-201ENST00000411258 284 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AP000275.1-201ENST00000411943 390 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC008280.1-201ENST00000418851 412 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 HIGD1AP11-201ENST00000438361 280 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC006967.1-201ENST00000467608 589 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 FTH1P21-201ENST00000512179 511 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC245517.5-201ENST00000611529 162 ntBASIC6.53□□□□□ -1.36
RC3H1Q5TC82 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RC3H1Q5TC82 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.36
RC3H1Q5TC82 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
RC3H1Q5TC82 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 Y_RNA.20-201ENST00000362479 113 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 RNU6-179P-201ENST00000363350 107 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC068538.1-201ENST00000376856 336 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 RNU6-1207P-201ENST00000384343 107 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC016769.3-201ENST00000396562 315 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AL133384.1-201ENST00000412744 351 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 ELOCP20-201ENST00000422460 345 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC092651.1-201ENST00000426110 312 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 RPS26P40-201ENST00000435209 294 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 TMSB4XP3-201ENST00000445144 114 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AL354714.3-201ENST00000447284 493 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 RPL23AP15-201ENST00000450202 459 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC005297.2-201ENST00000450430 606 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC022447.4-201ENST00000504053 364 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 RNA5SP384-201ENST00000516615 116 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 SETP2-201ENST00000553886 926 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC136624.4-201ENST00000573044 370 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC127459.3-201ENST00000624328 466 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms