Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.13□□□□□ -1.91
ZIC1Q15915 MTND4P33-201ENST00000556706 766 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC1Q15915 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.13□□□□□ -1.91
ZIC1Q15915 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.13□□□□□ -1.91
ZIC1Q15915 MIR4637-201ENST00000582405 84 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 RPL23AP92-201ENST00000603609 255 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC1Q15915 AC243773.3-201ENST00000613270 256 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 AC092628.2-201ENST00000622492 339 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 AC006963.1-201ENST00000624003 1052 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.13□□□□□ -1.91
ZIC1Q15915 AC116618.1-201ENST00000634617 774 ntBASIC3.13□□□□□ -1.91
ZIC1Q15915 AC007256.1-201ENST00000392253 2765 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZIC1Q15915 SNORA38.1-201ENST00000364172 131 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 SETP5-201ENST00000437270 562 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AL445669.2-201ENST00000454425 421 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 SNORD11.1-201ENST00000459482 85 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 MTND1P16-201ENST00000465177 898 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC108729.1-201ENST00000487812 947 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC026427.2-201ENST00000506228 536 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC026412.2-201ENST00000512270 1075 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC109445.1-201ENST00000512356 383 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 RNU6-583P-201ENST00000516012 92 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 RNU6-27P-201ENST00000516146 107 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AP004371.1-201ENST00000525240 214 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 HSPE1P3-201ENST00000559254 309 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.12□□□□□ -1.91
ZIC1Q15915 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC008507.1-201ENST00000587506 734 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AL391001.1-201ENST00000602747 715 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC006254.3-201ENST00000603353 884 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC080013.3-201ENST00000606839 578 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
ZIC1Q15915 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZIC1Q15915 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.12□□□□□ -1.91
ZIC1Q15915 AP002907.1-201ENST00000606361 1430 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 RNU6-1249P-201ENST00000363237 111 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 Y_RNA.311-201ENST00000365068 96 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC1Q15915 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC1Q15915 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ZIC1Q15915 TAF9BP1-201ENST00000396646 746 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 SKINT1L-201ENST00000401057 817 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 AL138880.1-201ENST00000405824 642 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.11□□□□□ -1.91
ZIC1Q15915 TIMM9P2-201ENST00000419324 266 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 PSMA6P3-201ENST00000428242 164 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC1Q15915 RPL23AP83-201ENST00000434984 473 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 RPL23AP74-201ENST00000437246 471 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 MTCO2P20-201ENST00000437339 673 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 FGF7P5-201ENST00000441829 291 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC1Q15915 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
ZIC1Q15915 OFD1P3Y-201ENST00000453312 783 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 HMGB1P25-201ENST00000468402 607 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.11□□□□□ -1.91
ZIC1Q15915 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZIC1Q15915 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.11□□□□□ -1.91
ZIC1Q15915 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.11□□□□□ -1.91
ZIC1Q15915 TMEM251P1-201ENST00000503717 318 ntBASIC3.11□□□□□ -1.91
ZIC1Q15915 AC110794.1-201ENST00000505816 425 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms