Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC5Q00444 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC5Q00444 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC5Q00444 RNU6-252P-201ENST00000363232 107 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 SNORD56.5-201ENST00000364281 72 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 CD24P4-201ENST00000382840 243 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 RNU6-444P-201ENST00000383988 108 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 USP9YP36-201ENST00000424581 829 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AC073508.1-201ENST00000428866 656 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AP000936.2-201ENST00000447151 681 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC5Q00444 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC104472.2-201ENST00000469035 601 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC104057.1-201ENST00000515547 497 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 RNU6-488P-201ENST00000515918 99 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AP001029.3-201ENST00000588063 596 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AC073387.2-201ENST00000604797 784 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 AC245100.7-201ENST00000609678 442 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC5Q00444 SNHG22-203ENST00000617833 660 ntBASIC2.33□□□□□ -2.04
HOXC5Q00444 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC5Q00444 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HOXC5Q00444 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXC5Q00444 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC5Q00444 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC5Q00444 RNU6-1339P-201ENST00000363574 91 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC5Q00444 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 RNU6-1005P-201ENST00000384519 107 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 RNU6-1151P-201ENST00000384684 107 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 HMGB3P31-201ENST00000413333 595 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AC080125.1-201ENST00000414888 684 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC5Q00444 PAICSP7-201ENST00000419829 962 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 FNDC3CP-201ENST00000420795 1155 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 MTATP6P4-201ENST00000427725 675 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC5Q00444 ARL5AP4-201ENST00000430731 512 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 AL109741.2-201ENST00000455561 343 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC5Q00444 OR5H5P-201ENST00000503164 928 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC5Q00444 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC5Q00444 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 AC105914.1-201ENST00000511798 226 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC5Q00444 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HOXC5Q00444 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC5Q00444 MIR4446-201ENST00000578505 67 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 ELOCP29-201ENST00000588193 334 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 RPL23AP78-201ENST00000599928 470 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 RPL12P50-201ENST00000603116 116 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AP001330.4-201ENST00000604350 154 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC5Q00444 AP003400.6-201ENST00000624698 740 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 AC097372.4-201ENST00000625025 466 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 AC068620.4-201ENST00000636730 1182 ntBASIC2.32□□□□□ -2.04
HOXC5Q00444 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXC5Q00444 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC5Q00444 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC5Q00444 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC5Q00444 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC5Q00444 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC5Q00444 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 RNU1-100P-201ENST00000365255 165 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC5Q00444 ATP5F1P6-201ENST00000402768 767 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AL162578.1-201ENST00000406202 378 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 SNORA11.1-201ENST00000408133 129 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 RNA5SP38-201ENST00000410750 119 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 UBE2V1P9-201ENST00000414760 368 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 BX682237.1-201ENST00000415016 335 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 ARL2BPP3-201ENST00000421226 480 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.31□□□□□ -2.04
HOXC5Q00444 AL355994.1-201ENST00000424379 260 ntBASIC2.31□□□□□ -2.04
HOXC5Q00444 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC5Q00444 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms