Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 RPS20P5-201ENST00000434808 360 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.32□□□□□ -2.04
VBP1P61758 AC004022.1-201ENST00000447766 1066 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VBP1P61758 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.32□□□□□ -2.04
VBP1P61758 PNPLA4P1-201ENST00000458328 305 ntBASIC2.32□□□□□ -2.04
VBP1P61758 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AP000926.3-201ENST00000497201 299 ntBASIC2.32□□□□□ -2.04
VBP1P61758 KLRA1P-201ENST00000503499 986 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AC117522.3-201ENST00000507974 584 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC107222.1-201ENST00000510899 637 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 RNU6-488P-201ENST00000515918 99 ntBASIC2.32□□□□□ -2.04
VBP1P61758 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.32□□□□□ -2.04
VBP1P61758 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.32□□□□□ -2.04
VBP1P61758 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
VBP1P61758 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.32□□□□□ -2.04
VBP1P61758 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AC090888.1-201ENST00000561335 1141 ntBASIC2.32□□□□□ -2.04
VBP1P61758 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
VBP1P61758 MIR5680-201ENST00000577577 84 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC011260.1-201ENST00000578420 472 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 AC026422.1-201ENST00000623961 452 ntBASIC2.32□□□□□ -2.04
VBP1P61758 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VBP1P61758 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VBP1P61758 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.31□□□□□ -2.04
VBP1P61758 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VBP1P61758 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VBP1P61758 HMGB1P5-201ENST00000255320 642 ntBASIC2.31□□□□□ -2.04
VBP1P61758 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VBP1P61758 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VBP1P61758 U3.37-201ENST00000408528 213 ntBASIC2.31□□□□□ -2.04
VBP1P61758 RPLP0P7-201ENST00000416050 667 ntBASIC2.31□□□□□ -2.04
VBP1P61758 RPL7P44-201ENST00000424827 742 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AL358075.3-201ENST00000426289 226 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AC234781.2-201ENST00000426370 994 ntBASIC2.31□□□□□ -2.04
VBP1P61758 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.31□□□□□ -2.04
VBP1P61758 AC008280.2-201ENST00000455473 307 ntBASIC2.31□□□□□ -2.04
VBP1P61758 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.31□□□□□ -2.04
VBP1P61758 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.31□□□□□ -2.04
VBP1P61758 MTND4LP31-201ENST00000514859 294 ntBASIC2.31□□□□□ -2.04
VBP1P61758 BTF3P12-201ENST00000519620 469 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.31□□□□□ -2.04
VBP1P61758 AC084824.1-201ENST00000550917 1005 ntBASIC2.31□□□□□ -2.04
VBP1P61758 HMGB1P14-201ENST00000557424 591 ntBASIC2.31□□□□□ -2.04
VBP1P61758 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.31□□□□□ -2.04
VBP1P61758 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.31□□□□□ -2.04
VBP1P61758 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
VBP1P61758 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.31□□□□□ -2.04
VBP1P61758 AC138473.1-201ENST00000605717 526 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AP005137.2-201ENST00000609238 400 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AC018926.3-201ENST00000618841 406 ntBASIC2.31□□□□□ -2.04
VBP1P61758 VN1R7P-201ENST00000619242 903 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AP006248.3-201ENST00000623580 594 ntBASIC2.31□□□□□ -2.04
VBP1P61758 AC007336.1-201ENST00000576365 3828 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
VBP1P61758 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
VBP1P61758 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VBP1P61758 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VBP1P61758 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VBP1P61758 AL162578.1-201ENST00000406202 378 ntBASIC2.3□□□□□ -2.04
VBP1P61758 DHFRP5-201ENST00000406944 564 ntBASIC2.3□□□□□ -2.04
VBP1P61758 RNU6ATAC-201ENST00000408749 126 ntBASIC2.3□□□□□ -2.04
VBP1P61758 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.3□□□□□ -2.04
VBP1P61758 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
VBP1P61758 USP9YP20-201ENST00000419224 558 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.3□□□□□ -2.04
VBP1P61758 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC005300.1-201ENST00000428401 373 ntBASIC2.3□□□□□ -2.04
VBP1P61758 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC091286.1-201ENST00000431233 461 ntBASIC2.3□□□□□ -2.04
VBP1P61758 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 RNU6-491P-201ENST00000516099 110 ntBASIC2.3□□□□□ -2.04
VBP1P61758 SNORA70.16-201ENST00000516390 95 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.3□□□□□ -2.04
VBP1P61758 OR5BN1P-201ENST00000532955 829 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.3□□□□□ -2.04
VBP1P61758 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.3□□□□□ -2.04
VBP1P61758 SNORD53-201ENST00000579969 78 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC093227.2-201ENST00000589357 285 ntBASIC2.3□□□□□ -2.04
VBP1P61758 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.3□□□□□ -2.04
VBP1P61758 AC079395.3-201ENST00000615161 484 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC009090.3-201ENST00000616553 565 ntBASIC2.3□□□□□ -2.04
VBP1P61758 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
VBP1P61758 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
VBP1P61758 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms