Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC079203.1-201ENST00000487972 404 ntBASIC3.49□□□□□ -1.85
VCPP55072 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 AC112198.1-201ENST00000505369 1220 ntBASIC3.49□□□□□ -1.85
VCPP55072 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 MTND4LP22-201ENST00000508209 276 ntBASIC3.49□□□□□ -1.85
VCPP55072 AC004062.1-201ENST00000509926 645 ntBASIC3.49□□□□□ -1.85
VCPP55072 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.49□□□□□ -1.85
VCPP55072 AC103783.1-201ENST00000520506 373 ntBASIC3.49□□□□□ -1.85
VCPP55072 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 AC091057.3-201ENST00000602684 733 ntBASIC3.49□□□□□ -1.85
VCPP55072 AL109653.1-201ENST00000603091 248 ntBASIC3.49□□□□□ -1.85
VCPP55072 AC006557.5-201ENST00000603126 811 ntBASIC3.49□□□□□ -1.85
VCPP55072 AL445435.1-201ENST00000604232 665 ntBASIC3.49□□□□□ -1.85
VCPP55072 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VCPP55072 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.49□□□□□ -1.85
VCPP55072 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
VCPP55072 MTND5P31-201ENST00000419366 1374 ntBASIC3.49□□□□□ -1.85
VCPP55072 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCPP55072 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
VCPP55072 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCPP55072 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.48□□□□□ -1.85
VCPP55072 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VCPP55072 AL356274.2-201ENST00000624379 3752 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC004925.1-201ENST00000624256 2706 ntBASIC3.48□□□□□ -1.85
VCPP55072 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.48□□□□□ -1.85
VCPP55072 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VCPP55072 RNU6-839P-201ENST00000363347 108 ntBASIC3.48□□□□□ -1.85
VCPP55072 SNORD116-23-201ENST00000384645 92 ntBASIC3.48□□□□□ -1.85
VCPP55072 AL079342.2-201ENST00000403367 482 ntBASIC3.48□□□□□ -1.85
VCPP55072 RNA5SP293-201ENST00000410527 113 ntBASIC3.48□□□□□ -1.85
VCPP55072 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 RAD23BP2-201ENST00000416003 1207 ntBASIC3.48□□□□□ -1.85
VCPP55072 AL449283.1-202ENST00000418249 604 ntBASIC3.48□□□□□ -1.85
VCPP55072 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC096632.1-201ENST00000427395 310 ntBASIC3.48□□□□□ -1.85
VCPP55072 ZYG11AP1-201ENST00000430329 837 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 B3GNT2P1-201ENST00000434960 952 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.48□□□□□ -1.85
VCPP55072 MTCO1P53-201ENST00000441633 699 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.48□□□□□ -1.85
VCPP55072 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
VCPP55072 DYNLL1P6-201ENST00000503440 264 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 TXNP6-201ENST00000510190 310 ntBASIC3.48□□□□□ -1.85
VCPP55072 RNU6-885P-201ENST00000516607 104 ntBASIC3.48□□□□□ -1.85
VCPP55072 RNA5SP468-201ENST00000516782 93 ntBASIC3.48□□□□□ -1.85
VCPP55072 AP001207.2-201ENST00000519490 539 ntBASIC3.48□□□□□ -1.85
VCPP55072 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.48□□□□□ -1.85
VCPP55072 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
VCPP55072 OR4A45P-201ENST00000529954 901 ntBASIC3.48□□□□□ -1.85
VCPP55072 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.48□□□□□ -1.85
VCPP55072 AC074051.3-201ENST00000570238 358 ntBASIC3.48□□□□□ -1.85
VCPP55072 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.48□□□□□ -1.85
VCPP55072 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.48□□□□□ -1.85
VCPP55072 AC011458.1-201ENST00000604034 617 ntBASIC3.48□□□□□ -1.85
VCPP55072 AP003973.1-201ENST00000604639 691 ntBASIC3.48□□□□□ -1.85
VCPP55072 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.48□□□□□ -1.85
VCPP55072 AL390240.1-201ENST00000612950 384 ntBASIC3.48□□□□□ -1.85
VCPP55072 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VCPP55072 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VCPP55072 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
VCPP55072 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCPP55072 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
VCPP55072 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.48□□□□□ -1.85
VCPP55072 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
VCPP55072 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCPP55072 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VCPP55072 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VCPP55072 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VCPP55072 MAPK10-362ENST00000641864 4484 ntBASIC3.47□□□□□ -1.85
VCPP55072 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
VCPP55072 RNU6-582P-201ENST00000362989 107 ntBASIC3.47□□□□□ -1.85
VCPP55072 RNU6-115P-201ENST00000364310 107 ntBASIC3.47□□□□□ -1.85
VCPP55072 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
VCPP55072 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VCPP55072 RNU6-339P-201ENST00000384310 107 ntBASIC3.47□□□□□ -1.85
VCPP55072 MIR217-201ENST00000384817 110 ntBASIC3.47□□□□□ -1.85
VCPP55072 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
VCPP55072 RNU4-47P-201ENST00000410876 114 ntBASIC3.47□□□□□ -1.85
VCPP55072 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms