Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLCNKAP51800 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCNKAP51800 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLCNKAP51800 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.81
CLCNKAP51800 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLCNKAP51800 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 MIR423-201ENST00000362201 94 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 RNU5F-6P-201ENST00000362979 116 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 RNU4-75P-201ENST00000364621 146 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AL031679.1-201ENST00000400616 525 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 SNORA57.3-201ENST00000411095 141 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AC006366.1-201ENST00000422002 759 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCNKAP51800 ATP5HP2-201ENST00000433885 485 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 Z74696.2-201ENST00000436514 498 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 RPL23AP74-201ENST00000437246 471 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC092473.1-201ENST00000441098 221 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 BMI1P1-201ENST00000445879 941 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 NPM1P49-201ENST00000448027 714 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 RPS17P13-201ENST00000448974 407 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AC091564.1-201ENST00000464563 479 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 FAM172BP-201ENST00000487497 1089 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 HMGB1P36-201ENST00000487709 576 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 SCARNA14-201ENST00000516903 136 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 IGKV2D-23-201ENST00000518179 286 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC022861.1-201ENST00000522981 663 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 HSPA8P13-201ENST00000523715 472 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCNKAP51800 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AC087499.8-201ENST00000578406 226 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCNKAP51800 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 MIR548AB-201ENST00000584917 84 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 OR4G1P-201ENST00000588632 938 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 AC244505.7-201ENST00000599675 272 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 IGHV3-29-201ENST00000604817 344 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC128687.1-201ENST00000605304 619 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AL513477.2-201ENST00000607858 568 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 HULC.1-201ENST00000612720 240 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 AC009878.1-201ENST00000621819 340 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCNKAP51800 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCNKAP51800 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCNKAP51800 UBE3AP2-201ENST00000429033 2259 ntBASIC3.77□□□□□ -1.81
CLCNKAP51800 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCNKAP51800 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLCNKAP51800 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCNKAP51800 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLCNKAP51800 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLCNKAP51800 Y_RNA.97-201ENST00000363094 102 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 Y_RNA.194-201ENST00000363985 102 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 MIR554-201ENST00000384874 96 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 MIR320C1-201ENST00000408566 88 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 MTCO2P34-201ENST00000421994 607 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCNKAP51800 AC244098.2-201ENST00000422068 99 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 GLRXP1-201ENST00000423261 334 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.76□□□□□ -1.81
CLCNKAP51800 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCNKAP51800 AL591419.1-201ENST00000427423 339 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AC127537.2-201ENST00000439258 465 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AC002381.1-201ENST00000447049 280 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.76□□□□□ -1.81
CLCNKAP51800 RNU6-956P-201ENST00000458868 103 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 RPL7P15-201ENST00000461190 712 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AL133162.1-201ENST00000463228 453 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 RPL21P104-201ENST00000464143 478 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 RN7SL542P-201ENST00000467147 294 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AC022034.3-201ENST00000471393 478 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCNKAP51800 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCNKAP51800 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCNKAP51800 AC109458.1-201ENST00000508858 316 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 MTCO3P44-201ENST00000510977 541 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AC093853.1-201ENST00000515689 483 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 IGKV2D-36-201ENST00000518643 226 ntBASIC3.76□□□□□ -1.81
CLCNKAP51800 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCNKAP51800 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCNKAP51800 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCNKAP51800 MIR5187-201ENST00000583479 76 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms