Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FTH1P21-201ENST00000512179 511 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 RN7SKP283-201ENST00000517197 270 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AC007991.1-201ENST00000522680 631 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA4P43681 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA4P43681 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 uc_338.7-201ENST00000621834 124 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 MIR8080-201ENST00000622224 89 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AC125336.1-201ENST00000508893 2827 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.44□□□□□ -1.54
CHRNA4P43681 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA4P43681 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CHRNA4P43681 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 AP001284.1-201ENST00000528393 2118 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CHRNA4P43681 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 ZNF72P-201ENST00000425869 1908 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 SNORD62.1-201ENST00000362541 86 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 RNA5SP335-201ENST00000363817 110 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 Y_RNA.237-201ENST00000364439 102 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 RNU6-306P-201ENST00000384617 107 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 RNU1-77P-201ENST00000390868 162 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 MRPL35P1-201ENST00000404272 572 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 RN7SKP235-201ENST00000410662 305 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 RN7SKP293-201ENST00000411389 296 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 GPS2P1-201ENST00000411761 986 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AL139095.3-201ENST00000419672 1203 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA4P43681 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AC104472.2-201ENST00000469035 601 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 RN7SL184P-201ENST00000488308 297 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AC093267.1-201ENST00000489176 961 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA4P43681 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 RNU6-313P-201ENST00000516317 112 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 IGKV2-38-201ENST00000517443 247 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA4P43681 CYCSP28-201ENST00000534284 321 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA4P43681 SETP2-201ENST00000553886 926 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AC022884.2-201ENST00000578535 580 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 MIR5692C1-201ENST00000585309 91 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AL589674.2-201ENST00000604304 337 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 MIR6768-201ENST00000610734 72 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 RNA5SP439-201ENST00000617595 124 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AL159153.1-201ENST00000619688 317 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 MIR6886-201ENST00000619864 61 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AL365265.1-201ENST00000621045 234 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA4P43681 AP001029.2-203ENST00000589795 4910 ntBASIC5.43□□□□□ -1.54
CHRNA4P43681 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA4P43681 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA4P43681 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA4P43681 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 AL359893.1-201ENST00000447628 1580 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 ZNF285B-201ENST00000561698 1767 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA4P43681 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA4P43681 AL078621.3-201ENST00000623707 2042 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA4P43681 AL391987.6-201ENST00000305671 199 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 Y_RNA.84-201ENST00000363011 104 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 Y_RNA.105-201ENST00000363182 111 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 SNORD115-7-201ENST00000365306 82 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 RNU6-95P-201ENST00000384697 107 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 MIR320B1-201ENST00000390209 79 ntBASIC5.42□□□□□ -1.54
CHRNA4P43681 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms