Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNU6-288P-201ENST00000363690 104 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 SNORA20.1-201ENST00000364790 130 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 RN7SKP187-201ENST00000365536 330 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 Y_RNA.483-201ENST00000384380 101 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AC013442.1-201ENST00000397347 228 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AL590704.1-201ENST00000402856 794 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 RNU2-38P-201ENST00000410856 79 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AC108032.1-201ENST00000416706 207 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AL137014.1-201ENST00000420490 1226 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AC099782.1-201ENST00000425889 474 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.52□□□□□ -1.37
CLCN1P35523 RPL12P11-201ENST00000439970 501 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 RPS3AP12-201ENST00000443616 753 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 CHEK2P4-201ENST00000450340 246 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 RPL23AP31-201ENST00000456160 467 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.52□□□□□ -1.37
CLCN1P35523 FTH1P2-201ENST00000466086 412 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.52□□□□□ -1.37
CLCN1P35523 AC104109.1-201ENST00000498563 436 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AC083829.1-201ENST00000503756 657 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AP006245.2-201ENST00000522004 300 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.52□□□□□ -1.37
CLCN1P35523 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.52□□□□□ -1.37
CLCN1P35523 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.52□□□□□ -1.37
CLCN1P35523 AC009643.1-201ENST00000532030 391 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.52□□□□□ -1.37
CLCN1P35523 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.52□□□□□ -1.37
CLCN1P35523 HMGB1P50-201ENST00000605814 607 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 NANOGP3-201ENST00000605855 286 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AL596275.2-204ENST00000641628 552 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 AL596275.2-206ENST00000641957 626 ntBASIC6.52□□□□□ -1.37
CLCN1P35523 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.52□□□□□ -1.37
CLCN1P35523 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLCN1P35523 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
CLCN1P35523 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLCN1P35523 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLCN1P35523 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLCN1P35523 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.52□□□□□ -1.37
CLCN1P35523 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CLCN1P35523 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CLCN1P35523 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CLCN1P35523 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
CLCN1P35523 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.51□□□□□ -1.37
CLCN1P35523 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.51□□□□□ -1.37
CLCN1P35523 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CLCN1P35523 OR56A5-201ENST00000340110 738 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 RNU105B-201ENST00000364478 208 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 Y_RNA.276-201ENST00000364732 109 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 Y_RNA.577-201ENST00000384794 101 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 RNA5SP91-201ENST00000390902 119 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 RNU6-1156P-201ENST00000410365 100 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AL096829.1-201ENST00000413677 457 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 THEM7P-201ENST00000419556 672 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.51□□□□□ -1.37
CLCN1P35523 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.51□□□□□ -1.37
CLCN1P35523 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.51□□□□□ -1.37
CLCN1P35523 MTCO3P8-201ENST00000453691 755 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 RNU6-953P-201ENST00000459154 107 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AP000942.1-201ENST00000463969 747 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 RPL12P20-201ENST00000475538 479 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AC098818.1-201ENST00000478593 252 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AC098976.1-201ENST00000513014 541 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.51□□□□□ -1.37
CLCN1P35523 ERHP1-201ENST00000523006 310 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CLCN1P35523 AC084783.1-201ENST00000565846 910 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AC015720.2-201ENST00000567709 334 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 MIR7853-201ENST00000584820 132 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AC093227.2-201ENST00000589357 285 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AC119403.2-201ENST00000590960 598 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 RNU6-85P-201ENST00000605989 107 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 AL355810.1-201ENST00000614629 552 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 uc_338.29-201ENST00000615099 168 ntBASIC6.51□□□□□ -1.37
CLCN1P35523 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.51□□□□□ -1.37
CLCN1P35523 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLCN1P35523 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.5□□□□□ -1.37
CLCN1P35523 AC114947.2-201ENST00000565748 2125 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CLCN1P35523 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
CLCN1P35523 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN1P35523 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN1P35523 Y_RNA.14-201ENST00000362415 103 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 SNORA21-201ENST00000362423 132 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 RNU4-42P-201ENST00000364738 142 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 Y_RNA.477-201ENST00000384352 108 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.5□□□□□ -1.37
CLCN1P35523 RBMY1KP-201ENST00000423480 476 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
CLCN1P35523 RPL7P2-201ENST00000427639 268 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 AC008065.1-201ENST00000428525 348 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 AL133396.1-201ENST00000432048 687 ntBASIC6.5□□□□□ -1.37
CLCN1P35523 NDUFB4P8-201ENST00000435351 367 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms