Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AP003973.1-201ENST00000604639 691 ntBASIC2.39□□□□□ -2.03
CD28P10747 AP002802.2-201ENST00000605877 235 ntBASIC2.39□□□□□ -2.03
CD28P10747 AC091946.2-201ENST00000606105 291 ntBASIC2.39□□□□□ -2.03
CD28P10747 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.39□□□□□ -2.03
CD28P10747 AC107294.3-201ENST00000609211 526 ntBASIC2.39□□□□□ -2.03
CD28P10747 AC018926.1-201ENST00000616335 435 ntBASIC2.39□□□□□ -2.03
CD28P10747 AC007275.1-201ENST00000621243 671 ntBASIC2.39□□□□□ -2.03
CD28P10747 AL590240.3-201ENST00000621416 943 ntBASIC2.39□□□□□ -2.03
CD28P10747 AL360181.4-201ENST00000621752 134 ntBASIC2.39□□□□□ -2.03
CD28P10747 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.39□□□□□ -2.03
CD28P10747 AL157770.1-201ENST00000623049 439 ntBASIC2.39□□□□□ -2.03
CD28P10747 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.39□□□□□ -2.03
CD28P10747 MTND5P27-201ENST00000428871 1720 ntBASIC2.39□□□□□ -2.03
CD28P10747 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.39□□□□□ -2.03
CD28P10747 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CD28P10747 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.39□□□□□ -2.03
CD28P10747 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.38□□□□□ -2.03
CD28P10747 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 AL079305.1-201ENST00000623159 3008 ntBASIC2.38□□□□□ -2.03
CD28P10747 MAPK10-322ENST00000641485 4530 ntBASIC2.38□□□□□ -2.03
CD28P10747 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 HMGB1P5-201ENST00000255320 642 ntBASIC2.38□□□□□ -2.03
CD28P10747 ANKRD36P1-201ENST00000344424 659 ntBASIC2.38□□□□□ -2.03
CD28P10747 SNORD82-201ENST00000365530 70 ntBASIC2.38□□□□□ -2.03
CD28P10747 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.38□□□□□ -2.03
CD28P10747 RNU6-1257P-201ENST00000384625 110 ntBASIC2.38□□□□□ -2.03
CD28P10747 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL035405.1-201ENST00000400795 710 ntBASIC2.38□□□□□ -2.03
CD28P10747 RPL7P25-201ENST00000404151 721 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL133264.1-201ENST00000407157 562 ntBASIC2.38□□□□□ -2.03
CD28P10747 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 RNU6-712P-201ENST00000410558 100 ntBASIC2.38□□□□□ -2.03
CD28P10747 HMGB3P23-201ENST00000414981 585 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.38□□□□□ -2.03
CD28P10747 MTCO3P12-201ENST00000416718 547 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.38□□□□□ -2.03
CD28P10747 DUTP6-201ENST00000425573 462 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.38□□□□□ -2.03
CD28P10747 HIGD1AP11-201ENST00000438361 280 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.38□□□□□ -2.03
CD28P10747 MTCO1P48-201ENST00000448024 1096 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.38□□□□□ -2.03
CD28P10747 RPS20P24-201ENST00000457473 361 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC096751.1-202ENST00000502691 1067 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC093767.1-201ENST00000504523 156 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC069306.1-201ENST00000507006 843 ntBASIC2.38□□□□□ -2.03
CD28P10747 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 MTCO2P32-201ENST00000514865 403 ntBASIC2.38□□□□□ -2.03
CD28P10747 RNA5SP217-201ENST00000515959 91 ntBASIC2.38□□□□□ -2.03
CD28P10747 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 AC245166.1-201ENST00000521012 253 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.38□□□□□ -2.03
CD28P10747 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CD28P10747 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.38□□□□□ -2.03
CD28P10747 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.38□□□□□ -2.03
CD28P10747 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 AP001029.3-201ENST00000588063 596 ntBASIC2.38□□□□□ -2.03
CD28P10747 AP001542.2-201ENST00000593141 364 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.38□□□□□ -2.03
CD28P10747 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 AC099785.1-201ENST00000605697 437 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL390240.1-201ENST00000612950 384 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL110115.1-201ENST00000614396 364 ntBASIC2.38□□□□□ -2.03
CD28P10747 AC010975.3-201ENST00000618727 978 ntBASIC2.38□□□□□ -2.03
CD28P10747 AL353748.2-201ENST00000622148 471 ntBASIC2.38□□□□□ -2.03
CD28P10747 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CD28P10747 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD28P10747 AL645568.2-201ENST00000432815 1337 ntBASIC2.38□□□□□ -2.03
CD28P10747 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.38□□□□□ -2.03
CD28P10747 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CD28P10747 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CD28P10747 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CD28P10747 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.37□□□□□ -2.03
CD28P10747 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.37□□□□□ -2.03
CD28P10747 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CD28P10747 DEFB109C-201ENST00000382575 264 ntBASIC2.37□□□□□ -2.03
CD28P10747 DEFB109B-201ENST00000382656 264 ntBASIC2.37□□□□□ -2.03
CD28P10747 SNORA40.4-201ENST00000390971 128 ntBASIC2.37□□□□□ -2.03
CD28P10747 ARF4P3-201ENST00000397387 509 ntBASIC2.37□□□□□ -2.03
CD28P10747 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.37□□□□□ -2.03
CD28P10747 MIR1289-1-201ENST00000408836 144 ntBASIC2.37□□□□□ -2.03
CD28P10747 AC006960.1-201ENST00000419980 153 ntBASIC2.37□□□□□ -2.03
CD28P10747 EZH2P1-201ENST00000431167 291 ntBASIC2.37□□□□□ -2.03
CD28P10747 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.37□□□□□ -2.03
CD28P10747 HMGN2P20-201ENST00000437531 273 ntBASIC2.37□□□□□ -2.03
CD28P10747 AP000949.1-201ENST00000438328 629 ntBASIC2.37□□□□□ -2.03
CD28P10747 PTGES3P1-201ENST00000439531 483 ntBASIC2.37□□□□□ -2.03
CD28P10747 TRIM60P18-201ENST00000441518 828 ntBASIC2.37□□□□□ -2.03
CD28P10747 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.37□□□□□ -2.03
CD28P10747 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.37□□□□□ -2.03
CD28P10747 snoU13.4-201ENST00000458916 104 ntBASIC2.37□□□□□ -2.03
CD28P10747 AC010301.1-201ENST00000473936 355 ntBASIC2.37□□□□□ -2.03
CD28P10747 NAMPTP2-201ENST00000505629 1115 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms