Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 RNU6-263P-201ENST00000363811 107 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 U8.8-201ENST00000365399 135 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 SNORA41-201ENST00000384675 132 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 RNU6-837P-201ENST00000391056 108 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 FAT1P1-201ENST00000406588 507 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 RAD23BP2-201ENST00000416003 1207 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AL034418.1-201ENST00000448675 860 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 RNF138P1-201ENST00000502765 546 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AC109329.2-201ENST00000519658 482 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ADAM3B-201ENST00000569937 840 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AL669831.4-202ENST00000590817 238 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 BDH2P1-201ENST00000602288 736 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 RPL12P50-201ENST00000603116 116 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AC068831.7-201ENST00000616954 363 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AC243829.7-201ENST00000633081 225 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ZNF90P1-201ENST00000480493 1951 ntBASIC2.45□□□□□ -2.02
HLA-DQB2P05538 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AC046144.1-201ENST00000478559 1853 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 RNU6-50P-201ENST00000362356 103 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 SNORA51.12-201ENST00000384448 134 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 RPL17P50-201ENST00000396131 546 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC233728.2-201ENST00000425348 757 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 XKRY2-201ENST00000442362 1093 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC104472.2-201ENST00000469035 601 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC010301.1-201ENST00000473936 355 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC133963.2-201ENST00000513686 578 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 OR5BN1P-201ENST00000532955 829 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 SNORD84-203ENST00000584275 78 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC091057.2-201ENST00000602594 792 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC113368.1-201ENST00000603736 382 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC073387.2-201ENST00000604797 784 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC103810.6-201ENST00000606708 136 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AL356118.1-201ENST00000635272 1078 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC092435.3-201ENST00000565538 3654 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQB2P05538 AC016717.2-201ENST00000609089 5141 ntBASIC2.44□□□□□ -2.02
HLA-DQB2P05538 ZNF734P-201ENST00000419494 1534 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 FRG1BP-201ENST00000278882 761 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 MIR21-201ENST00000362134 72 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 Y_RNA.493-201ENST00000384422 102 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 MTND4P13-201ENST00000402078 1023 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 RNU2-17P-201ENST00000410290 190 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 RNU4-65P-201ENST00000410473 140 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 RPL19P1-201ENST00000411635 428 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 RPS3AP9-201ENST00000417027 792 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 NANOGP5-201ENST00000424456 877 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 RABEPKP1-201ENST00000440529 1026 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 RPL31P50-201ENST00000471002 296 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC234781.5-201ENST00000508429 271 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC008565.1-201ENST00000509046 885 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC114781.4-201ENST00000513707 639 ntBASIC2.43□□□□□ -2.02
HLA-DQB2P05538 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQB2P05538 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms