Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A1P02462 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.39□□□□□ -2.03
COL4A1P02462 OR52A4P-203ENST00000498233 1014 ntBASIC2.39□□□□□ -2.03
COL4A1P02462 RNA5SP309-201ENST00000516670 106 ntBASIC2.39□□□□□ -2.03
COL4A1P02462 RPS3AP23-202ENST00000574601 686 ntBASIC2.39□□□□□ -2.03
COL4A1P02462 C2orf27A-204ENST00000623058 969 ntBASIC2.39□□□□□ -2.03
COL4A1P02462 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
COL4A1P02462 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A1P02462 AL353746.1-201ENST00000566293 6881 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL4A1P02462 AC011155.1-201ENST00000316512 456 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 Y_RNA.508-201ENST00000384502 114 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 RNU2-20P-201ENST00000410425 191 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.38□□□□□ -2.03
COL4A1P02462 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
COL4A1P02462 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.38□□□□□ -2.03
COL4A1P02462 AC087241.2-201ENST00000535801 324 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 AC090695.1-201ENST00000561269 1222 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 AL359198.2-201ENST00000611836 194 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL4A1P02462 AC002064.3-201ENST00000623448 346 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.38□□□□□ -2.03
COL4A1P02462 AC092447.7-201ENST00000422212 1621 ntBASIC2.38□□□□□ -2.03
COL4A1P02462 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.38□□□□□ -2.03
COL4A1P02462 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL4A1P02462 Y_RNA.269-201ENST00000364685 89 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A1P02462 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A1P02462 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A1P02462 VN1R31P-201ENST00000417498 730 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A1P02462 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A1P02462 AC124916.1-201ENST00000444020 547 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A1P02462 MTCYBP14-201ENST00000457471 715 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A1P02462 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A1P02462 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.37□□□□□ -2.03
COL4A1P02462 TTC39CP1-201ENST00000512513 755 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.37□□□□□ -2.03
COL4A1P02462 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A1P02462 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A1P02462 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A1P02462 MIR583-201ENST00000384846 75 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A1P02462 RNU6-321P-201ENST00000410912 106 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A1P02462 AC099336.2-201ENST00000422457 254 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 AL009174.1-201ENST00000426577 416 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 ARF4P2-201ENST00000430209 526 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A1P02462 AL353093.1-201ENST00000441292 436 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 MTND5P21-201ENST00000531961 522 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 MIR4255-201ENST00000579351 72 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 VN1R81P-201ENST00000602085 372 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.37□□□□□ -2.03
COL4A1P02462 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A1P02462 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.37□□□□□ -2.03
COL4A1P02462 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A1P02462 AL627390.1-201ENST00000396055 340 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 AL445685.2-201ENST00000422551 342 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A1P02462 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.36□□□□□ -2.03
COL4A1P02462 AC022431.1-201ENST00000450941 438 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 OR6C72P-201ENST00000451403 892 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 AC008571.1-201ENST00000467232 300 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.36□□□□□ -2.03
COL4A1P02462 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.36□□□□□ -2.03
COL4A1P02462 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.36□□□□□ -2.03
COL4A1P02462 AC068790.3-201ENST00000602988 553 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 AC012531.5-201ENST00000611375 151 ntBASIC2.36□□□□□ -2.03
COL4A1P02462 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A1P02462 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A1P02462 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A1P02462 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.36□□□□□ -2.03
COL4A1P02462 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A1P02462 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
COL4A1P02462 RPL5P19-201ENST00000404228 893 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 AF274854.1-201ENST00000413236 615 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.35□□□□□ -2.03
COL4A1P02462 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A1P02462 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.35□□□□□ -2.03
COL4A1P02462 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.35□□□□□ -2.03
COL4A1P02462 RPL34P26-201ENST00000445636 354 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 RPL7P31-201ENST00000450192 724 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A1P02462 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A1P02462 TRAV11-201ENST00000539512 339 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A1P02462 AC067838.1-201ENST00000606064 577 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 AC108479.2-201ENST00000617314 601 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A1P02462 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.35□□□□□ -2.03
COL4A1P02462 U6.98-201ENST00000637157 84 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL4A1P02462 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.35□□□□□ -2.03
COL4A1P02462 AC092326.2-201ENST00000624772 1561 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms