Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.63□□□□□ -1.83
NKX2-2O95096 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-2O95096 AL390237.1-201ENST00000404226 1415 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.63□□□□□ -1.83
NKX2-2O95096 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NKX2-2O95096 FGF7P2-201ENST00000332473 296 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 RNY3P10-201ENST00000384764 102 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 RPS20P2-201ENST00000402520 389 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 SSXP9-201ENST00000417503 292 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 MTCO1P39-201ENST00000426148 480 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC079780.1-201ENST00000428259 207 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.63□□□□□ -1.83
NKX2-2O95096 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 MTND1P28-201ENST00000435623 950 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 MTCO2P16-201ENST00000436962 677 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AL356535.1-201ENST00000440335 398 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 RANP8-201ENST00000444720 713 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC239367.2-201ENST00000447309 705 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AL359073.1-201ENST00000448036 403 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 MTND1P29-201ENST00000448112 647 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 MTND4LP3-201ENST00000468320 276 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-2O95096 RPL23AP55-201ENST00000498163 452 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-2O95096 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AF131216.2-201ENST00000512316 564 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC022483.1-201ENST00000514020 567 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 RNU6-201P-201ENST00000517100 61 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-2O95096 MIR548AB-201ENST00000584917 84 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 AC073544.2-201ENST00000601155 540 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC119501.1-201ENST00000603646 475 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC138749.5-201ENST00000611461 208 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC116165.2-201ENST00000616705 206 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC092140.2-201ENST00000618027 521 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC009268.2-201ENST00000621925 457 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-2O95096 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-2O95096 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-2O95096 TAB3P1-202ENST00000452645 1634 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-2O95096 RNU6-600P-201ENST00000362524 99 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 MIR199A2-201ENST00000385289 110 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 Y_RNA.608-201ENST00000410647 95 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 RN7SKP142-201ENST00000411236 328 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC078974.1-201ENST00000411597 223 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 OR4K11P-201ENST00000431829 904 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 OR4C10P-201ENST00000434991 931 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 HSFY6P-201ENST00000445573 403 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AL360221.1-201ENST00000445989 335 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AL592447.1-201ENST00000447592 540 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 USP9YP12-201ENST00000450481 570 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AL590365.1-201ENST00000450788 243 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC234775.1-201ENST00000454247 670 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 FGF7P3-201ENST00000454645 303 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 snoU13.4-201ENST00000458916 104 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 RPL21P11-201ENST00000461458 483 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 RPL23AP41-201ENST00000484754 458 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC069499.1-201ENST00000489433 509 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 KLHL2P1-201ENST00000508691 521 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AC091965.2-201ENST00000512324 613 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 RN7SKP244-201ENST00000516513 307 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AP002748.2-201ENST00000528671 348 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-2O95096 AC007115.1-201ENST00000546853 234 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 ZNF519P3-201ENST00000557158 1032 ntBASIC3.62□□□□□ -1.83
NKX2-2O95096 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-2O95096 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms