Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.64□□□□□ -1.99
LTN1O94822 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
LTN1O94822 snoU13.18-201ENST00000459483 104 ntBASIC2.64□□□□□ -1.99
LTN1O94822 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.64□□□□□ -1.99
LTN1O94822 AC117522.2-201ENST00000510049 657 ntBASIC2.64□□□□□ -1.99
LTN1O94822 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.64□□□□□ -1.99
LTN1O94822 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.64□□□□□ -1.99
LTN1O94822 AC090695.1-201ENST00000561269 1222 ntBASIC2.64□□□□□ -1.99
LTN1O94822 AC016877.3-201ENST00000606778 504 ntBASIC2.64□□□□□ -1.99
LTN1O94822 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.64□□□□□ -1.99
LTN1O94822 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LTN1O94822 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LTN1O94822 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LTN1O94822 Y_RNA.508-201ENST00000384502 114 ntBASIC2.64□□□□□ -1.99
LTN1O94822 AL450338.1-201ENST00000407987 512 ntBASIC2.64□□□□□ -1.99
LTN1O94822 RNU6-603P-201ENST00000411403 107 ntBASIC2.64□□□□□ -1.99
LTN1O94822 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.64□□□□□ -1.99
LTN1O94822 AC022431.1-201ENST00000450941 438 ntBASIC2.64□□□□□ -1.99
LTN1O94822 OR52A4P-203ENST00000498233 1014 ntBASIC2.64□□□□□ -1.99
LTN1O94822 AC006270.2-201ENST00000578523 652 ntBASIC2.64□□□□□ -1.99
LTN1O94822 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.64□□□□□ -1.99
LTN1O94822 MIR4512-201ENST00000583257 77 ntBASIC2.64□□□□□ -1.99
LTN1O94822 MAGOH2P-202ENST00000584384 429 ntBASIC2.64□□□□□ -1.99
LTN1O94822 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.64□□□□□ -1.99
LTN1O94822 SNRPGP19-201ENST00000603826 189 ntBASIC2.64□□□□□ -1.99
LTN1O94822 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.64□□□□□ -1.99
LTN1O94822 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.64□□□□□ -1.99
LTN1O94822 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.63□□□□□ -1.99
LTN1O94822 Y_RNA.796-201ENST00000364268 102 ntBASIC2.63□□□□□ -1.99
LTN1O94822 Y_RNA.799-201ENST00000364992 102 ntBASIC2.63□□□□□ -1.99
LTN1O94822 CYCSP49-201ENST00000420810 319 ntBASIC2.63□□□□□ -1.99
LTN1O94822 MTCO3P30-201ENST00000426425 670 ntBASIC2.63□□□□□ -1.99
LTN1O94822 DPPA2P1-201ENST00000428060 556 ntBASIC2.63□□□□□ -1.99
LTN1O94822 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.63□□□□□ -1.99
LTN1O94822 HMGB3P10-201ENST00000434734 572 ntBASIC2.63□□□□□ -1.99
LTN1O94822 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.63□□□□□ -1.99
LTN1O94822 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.63□□□□□ -1.99
LTN1O94822 FABP5P13-201ENST00000452144 328 ntBASIC2.63□□□□□ -1.99
LTN1O94822 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.63□□□□□ -1.99
LTN1O94822 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.63□□□□□ -1.99
LTN1O94822 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
LTN1O94822 SNORA31.26-201ENST00000517250 137 ntBASIC2.63□□□□□ -1.99
LTN1O94822 AC084757.1-201ENST00000559987 490 ntBASIC2.63□□□□□ -1.99
LTN1O94822 AC060766.3-201ENST00000591442 263 ntBASIC2.63□□□□□ -1.99
LTN1O94822 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.63□□□□□ -1.99
LTN1O94822 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LTN1O94822 AL118496.1-201ENST00000440201 1812 ntBASIC2.62□□□□□ -1.99
LTN1O94822 AC110774.1-201ENST00000623567 2018 ntBASIC2.62□□□□□ -1.99
LTN1O94822 RNA5SP295-201ENST00000362655 121 ntBASIC2.62□□□□□ -1.99
LTN1O94822 RPL7P54-201ENST00000438336 674 ntBASIC2.62□□□□□ -1.99
LTN1O94822 HMGB3P21-201ENST00000452483 547 ntBASIC2.62□□□□□ -1.99
LTN1O94822 GTF2IP9-201ENST00000502460 301 ntBASIC2.62□□□□□ -1.99
LTN1O94822 AC091917.2-201ENST00000505002 744 ntBASIC2.62□□□□□ -1.99
LTN1O94822 MTND4LP22-201ENST00000508209 276 ntBASIC2.62□□□□□ -1.99
LTN1O94822 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.62□□□□□ -1.99
LTN1O94822 AC090953.1-201ENST00000604305 1092 ntBASIC2.62□□□□□ -1.99
LTN1O94822 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.62□□□□□ -1.99
LTN1O94822 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LTN1O94822 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LTN1O94822 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LTN1O94822 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 RPL5P19-201ENST00000404228 893 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AC073310.1-201ENST00000423226 1033 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AL009174.1-201ENST00000426577 416 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.61□□□□□ -1.99
LTN1O94822 CLIC4P1-201ENST00000453177 535 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AC007182.2-201ENST00000489251 402 ntBASIC2.61□□□□□ -1.99
LTN1O94822 HMGB3P15-201ENST00000507326 574 ntBASIC2.61□□□□□ -1.99
LTN1O94822 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
LTN1O94822 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.61□□□□□ -1.99
LTN1O94822 MIR4781-201ENST00000585250 76 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AL356575.1-201ENST00000603008 283 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AC018754.1-201ENST00000607486 925 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AC009318.3-201ENST00000616916 503 ntBASIC2.61□□□□□ -1.99
LTN1O94822 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.61□□□□□ -1.99
LTN1O94822 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
LTN1O94822 MTND5P12-201ENST00000502851 1449 ntBASIC2.61□□□□□ -1.99
LTN1O94822 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LTN1O94822 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LTN1O94822 AC048351.1-201ENST00000420064 602 ntBASIC2.61□□□□□ -1.99
LTN1O94822 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.61□□□□□ -1.99
LTN1O94822 SDR42E1P3-201ENST00000438345 502 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AP000852.1-201ENST00000472460 573 ntBASIC2.61□□□□□ -1.99
LTN1O94822 SNX5P1-201ENST00000505757 1041 ntBASIC2.61□□□□□ -1.99
LTN1O94822 TTC39CP1-201ENST00000512513 755 ntBASIC2.61□□□□□ -1.99
LTN1O94822 MTCO1P30-201ENST00000515244 580 ntBASIC2.61□□□□□ -1.99
LTN1O94822 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.61□□□□□ -1.99
LTN1O94822 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.61□□□□□ -1.99
LTN1O94822 RPP40P2-201ENST00000603596 712 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AL359198.2-201ENST00000611836 194 ntBASIC2.61□□□□□ -1.99
LTN1O94822 AC108479.2-201ENST00000617314 601 ntBASIC2.61□□□□□ -1.99
LTN1O94822 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LTN1O94822 U3.15-201ENST00000365398 212 ntBASIC2.6□□□□□ -1.99
LTN1O94822 SNORA26.9-201ENST00000391322 122 ntBASIC2.6□□□□□ -1.99
LTN1O94822 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms