Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC092470.1-201ENST00000546187 132 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB3O75112 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.72□□□□□ -1.81
LDB3O75112 MAGOH2P-202ENST00000584384 429 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC083760.1-201ENST00000589621 670 ntBASIC3.72□□□□□ -1.81
LDB3O75112 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.72□□□□□ -1.81
LDB3O75112 AC080013.4-201ENST00000607624 649 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AC233309.1-201ENST00000619522 751 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL356321.1-201ENST00000621360 228 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AL008636.1-201ENST00000625038 1018 ntBASIC3.72□□□□□ -1.81
LDB3O75112 IQCB2P-201ENST00000401788 1633 ntBASIC3.72□□□□□ -1.81
LDB3O75112 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB3O75112 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
LDB3O75112 AL031985.3-201ENST00000565390 2449 ntBASIC3.72□□□□□ -1.81
LDB3O75112 AP002001.2-201ENST00000529025 1469 ntBASIC3.72□□□□□ -1.81
LDB3O75112 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB3O75112 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LDB3O75112 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
LDB3O75112 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
LDB3O75112 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LDB3O75112 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB3O75112 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.71□□□□□ -1.82
LDB3O75112 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LDB3O75112 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB3O75112 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LDB3O75112 RNA5SP479-201ENST00000364858 117 ntBASIC3.71□□□□□ -1.82
LDB3O75112 USP9YP6-201ENST00000413550 854 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB3O75112 CKS1BP5-201ENST00000434172 273 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 RANP8-201ENST00000444720 713 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 VN1R34P-201ENST00000447387 883 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 PAXBP1P1-201ENST00000449315 447 ntBASIC3.71□□□□□ -1.82
LDB3O75112 USP9YP34-201ENST00000453983 808 ntBASIC3.71□□□□□ -1.82
LDB3O75112 RNU7-136P-201ENST00000458819 69 ntBASIC3.71□□□□□ -1.82
LDB3O75112 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 AC090453.1-201ENST00000495560 436 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.71□□□□□ -1.82
LDB3O75112 ARL2BPP6-201ENST00000512757 439 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.71□□□□□ -1.82
LDB3O75112 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LDB3O75112 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
LDB3O75112 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
LDB3O75112 AP002453.2-201ENST00000533503 320 ntBASIC3.71□□□□□ -1.82
LDB3O75112 OR8R1P-201ENST00000543943 764 ntBASIC3.71□□□□□ -1.82
LDB3O75112 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB3O75112 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
LDB3O75112 AC124947.2-202ENST00000552735 133 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 AC091489.2-201ENST00000566263 604 ntBASIC3.71□□□□□ -1.82
LDB3O75112 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.71□□□□□ -1.82
LDB3O75112 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AL606490.9-201ENST00000603331 271 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AL009028.1-201ENST00000604895 802 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AL592436.1-201ENST00000605135 558 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC004067.1-201ENST00000608733 700 ntBASIC3.71□□□□□ -1.82
LDB3O75112 AC092954.2-201ENST00000609103 430 ntBASIC3.71□□□□□ -1.82
LDB3O75112 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.71□□□□□ -1.82
LDB3O75112 MIR6875-201ENST00000617506 72 ntBASIC3.71□□□□□ -1.82
LDB3O75112 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB3O75112 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.71□□□□□ -1.82
LDB3O75112 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LDB3O75112 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB3O75112 AC073544.1-201ENST00000600110 1595 ntBASIC3.71□□□□□ -1.82
LDB3O75112 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LDB3O75112 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
LDB3O75112 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB3O75112 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LDB3O75112 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 MTND5P3-201ENST00000438536 1800 ntBASIC3.7□□□□□ -1.82
LDB3O75112 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB3O75112 LINC02471-203ENST00000641941 4752 ntBASIC3.7□□□□□ -1.82
LDB3O75112 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 RNU6-1042P-201ENST00000384204 107 ntBASIC3.7□□□□□ -1.82
LDB3O75112 Y_RNA.582-201ENST00000391023 95 ntBASIC3.7□□□□□ -1.82
LDB3O75112 PPIAP31-201ENST00000405422 495 ntBASIC3.7□□□□□ -1.82
LDB3O75112 MIR1250-201ENST00000408098 113 ntBASIC3.7□□□□□ -1.82
LDB3O75112 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB3O75112 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB3O75112 AC109780.2-201ENST00000413467 845 ntBASIC3.7□□□□□ -1.82
LDB3O75112 HMGB1P11-201ENST00000413899 637 ntBASIC3.7□□□□□ -1.82
LDB3O75112 CCDC58P2-201ENST00000417131 366 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC005517.2-201ENST00000424673 553 ntBASIC3.7□□□□□ -1.82
LDB3O75112 USP9YP18-201ENST00000425912 695 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB3O75112 HMGB1P37-201ENST00000439613 609 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AL662791.1-201ENST00000441992 928 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AC244505.5-201ENST00000443639 207 ntBASIC3.7□□□□□ -1.82
LDB3O75112 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms