Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC113368.1-201ENST00000603736 382 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AL162274.2-201ENST00000614406 332 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC079395.3-201ENST00000615161 484 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC011330.2-201ENST00000621680 635 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC006927.4-201ENST00000639187 543 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 ZNF876P-202ENST00000398732 1485 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 AC058791.1-201ENST00000608412 3198 ntBASIC3.35□□□□□ -1.87
NEDD8-MDP1E9PL57 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-339P-201ENST00000384310 107 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AL024474.1-201ENST00000404655 591 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RNA5SP56-201ENST00000410277 118 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU2-37P-201ENST00000410695 177 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC012065.2-201ENST00000421295 375 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 XKRYP1-201ENST00000423438 492 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 XKRYP2-201ENST00000432915 492 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 TXNP1-201ENST00000441872 371 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 ELOCP13-201ENST00000443934 329 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 HMGN2P21-201ENST00000447764 270 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL18AP17-201ENST00000455326 198 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AP001992.1-205ENST00000462248 379 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC006445.1-201ENST00000491925 405 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL7P23-201ENST00000493874 747 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC104090.1-201ENST00000506341 1171 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 FABP5P12-201ENST00000515543 389 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AP001636.2-201ENST00000525517 696 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 SLC2A13P1-201ENST00000531560 322 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 OR6C73P-201ENST00000546432 358 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AL845331.3-202ENST00000562856 261 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC009097.3-201ENST00000563557 1018 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR4325-201ENST00000583049 90 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC061975.8-201ENST00000587058 721 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 VN1R92P-201ENST00000598511 928 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC234772.3-201ENST00000602277 528 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC124312.4-201ENST00000605533 310 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC121761.2-201ENST00000617300 689 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC009318.4-201ENST00000620496 486 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR4278-201ENST00000636094 69 ntBASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
NEDD8-MDP1E9PL57 GABPAP-201ENST00000419271 1356 ntBASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
NEDD8-MDP1E9PL57 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AP000776.1-201ENST00000530032 1663 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 RPS24P7-201ENST00000416921 246 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 HMGB1P49-201ENST00000418882 569 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL39P6-201ENST00000448289 150 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms