Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 CD24P4-201ENST00000382840 243 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU6-1226P-201ENST00000384317 107 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 MIR1289-1-201ENST00000408836 144 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU2-17P-201ENST00000410290 190 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNA5SP184-201ENST00000411071 108 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 UBE2D3P2-201ENST00000424409 445 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SETP8-201ENST00000435341 628 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AP001486.1-201ENST00000463339 476 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 KC877373.1-201ENST00000479066 408 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU6-760P-201ENST00000516078 97 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU6-826P-201ENST00000516827 104 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 HAUS1P3-201ENST00000523909 662 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL157394.1-201ENST00000562983 1224 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 COX6CP3-201ENST00000580869 223 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC061975.8-201ENST00000587058 721 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC092474.3-201ENST00000603022 568 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AP000787.2-201ENST00000604432 568 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC013468.1-201ENST00000608680 598 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC009570.1-201ENST00000609599 745 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC024595.1-201ENST00000623088 387 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC095031.1-201ENST00000623685 672 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL109659.3-201ENST00000624985 950 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC233263.6-201ENST00000631132 1963 ntBASIC2.18□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC092447.7-201ENST00000422212 1621 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC099654.7-201ENST00000635788 2127 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU6-1249P-201ENST00000363237 111 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SNORA5B-201ENST00000363786 132 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 U8.9-201ENST00000365667 134 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SNORA1.3-201ENST00000384676 136 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 MIR196B-201ENST00000384852 84 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNA5SP38-201ENST00000410750 119 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU6-272P-201ENST00000411028 104 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 OR4K6P-201ENST00000416478 897 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC096632.1-201ENST00000427395 310 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 FCF1P1-201ENST00000432690 571 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 UBE2V1P5-201ENST00000440070 405 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RPL23AP58-201ENST00000440453 469 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC005002.1-201ENST00000447458 540 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL590639.1-201ENST00000456484 337 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC008571.1-201ENST00000467232 300 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC004924.1-201ENST00000480160 781 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RN7SL432P-201ENST00000484057 298 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 ARL4AP2-201ENST00000507378 601 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU4-29P-201ENST00000515943 174 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 RNU6-56P-201ENST00000516986 93 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 UBTFL10-201ENST00000528532 562 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC018630.1-201ENST00000541376 925 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC027176.1-201ENST00000560204 514 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AADACP1-206ENST00000561502 1193 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC087481.2-201ENST00000565492 330 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC004775.1-201ENST00000607389 753 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AL359198.2-201ENST00000611836 194 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC009032.1-201ENST00000617574 431 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC007275.1-201ENST00000621243 671 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC092608.3-201ENST00000625017 386 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC083865.1-201ENST00000636634 831 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AC006378.2-201ENST00000623178 2476 ntBASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
IGKV1D-43A0A0B4J1Z2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms