Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-249P-201ENST00000363016 102 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU1-146P-201ENST00000364015 165 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.350-201ENST00000365409 98 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-209P-201ENST00000384118 107 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.461-201ENST00000384263 103 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 SNORA5.1-201ENST00000384275 131 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-14P-201ENST00000384630 106 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 HSPE1P8-201ENST00000406997 288 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC096921.1-201ENST00000411661 375 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL21P90-201ENST00000415692 466 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 BX842559.1-201ENST00000419615 532 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RPS15AP6-201ENST00000420703 385 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC099670.2-201ENST00000435130 321 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC090774.1-201ENST00000435925 246 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RPS12P17-201ENST00000438591 377 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 SUMO1P3-201ENST00000439961 304 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AL031274.1-201ENST00000450334 232 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RPS24P6-201ENST00000452670 400 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 PPIAP27-201ENST00000453800 265 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 FRG2FP-204ENST00000453982 852 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC118758.1-202ENST00000454719 225 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL23AP31-201ENST00000456160 467 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 PPIAP19-201ENST00000486414 492 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 VN1R104P-201ENST00000505115 1009 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC105758.1-201ENST00000506038 399 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 SCARNA18.1-201ENST00000516330 83 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU7-4P-201ENST00000516961 62 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 IGKV3D-25-201ENST00000519599 235 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 IGHV3-76-201ENST00000522465 295 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC040926.1-201ENST00000530195 238 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AL591516.1-201ENST00000611326 274 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC141273.2-201ENST00000618989 130 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AL591926.1-201ENST00000620542 217 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA11Q9Y5H2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 AC133552.1-201ENST00000569988 4007 ntBASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 MTND5P27-201ENST00000428871 1720 ntBASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHGA11Q9Y5H2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC144833.1-201ENST00000567953 4089 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 COX6B1P3-201ENST00000312310 260 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 OR56A5-201ENST00000340110 738 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SKP115-201ENST00000363177 317 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-1155P-201ENST00000363554 107 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-371P-201ENST00000364283 108 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 Y_RNA.276-201ENST00000364732 109 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-178P-201ENST00000384631 104 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL21P1-201ENST00000399532 476 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR1275-201ENST00000408770 80 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU2-43P-201ENST00000410306 190 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-1156P-201ENST00000410365 100 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU4-61P-201ENST00000411243 107 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 PPP1R11P2-201ENST00000423543 382 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 EI24P4-201ENST00000423683 1078 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC073063.1-201ENST00000434352 607 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL12P46-201ENST00000436610 195 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 ATP5LP2-201ENST00000440646 311 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC006539.1-201ENST00000481419 501 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AL117692.1-201ENST00000494283 713 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RPS27AP13-201ENST00000498403 237 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SKP183-201ENST00000517169 324 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 OR5D17P-201ENST00000531492 978 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms