Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL138726.1-201ENST00000614873 333 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 IRF5P1-201ENST00000504852 2164 ntBASIC6.48□□□□□ -1.37
ZC3H4Q9UPT8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 MTCO1P24-201ENST00000515438 1558 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 BDP1P-201ENST00000582658 1990 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 TPTE2P4-201ENST00000258589 1605 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.257-201ENST00000364596 102 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 RNU6-61P-201ENST00000365528 109 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 ADAM24P-201ENST00000398655 2101 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 RN7SKP17-201ENST00000411242 351 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC080125.1-201ENST00000414888 684 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 GNG5P5-201ENST00000420444 220 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 SCARNA18-201ENST00000459004 134 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 RPL21P8-201ENST00000465083 535 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 RPL21P93-201ENST00000480465 489 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC140172.1-201ENST00000502928 141 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.708-201ENST00000516950 96 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC087854.1-201ENST00000519706 414 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 MIR1254-2-201ENST00000579553 63 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 MIR3667-201ENST00000581025 74 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AL391358.1-201ENST00000605342 190 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC018889.1-201ENST00000605372 397 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AL365434.2-201ENST00000607979 234 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AL591926.8-201ENST00000616876 211 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 AC243312.2-201ENST00000623340 601 ntBASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ZC3H4Q9UPT8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ZC3H4Q9UPT8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
ZC3H4Q9UPT8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ZC3H4Q9UPT8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ZC3H4Q9UPT8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ZC3H4Q9UPT8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.46□□□□□ -1.37
ZC3H4Q9UPT8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC133552.1-201ENST00000569988 4007 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 Y_RNA.80-201ENST00000362996 102 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 Y_RNA.489-201ENST00000384410 101 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 RPL30P2-201ENST00000414021 291 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC093106.2-201ENST00000428212 385 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 TMEM183AP1-205ENST00000432739 290 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 HMGB1P12-201ENST00000438594 598 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC104472.2-201ENST00000469035 601 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC092451.1-201ENST00000480211 153 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC116337.1-201ENST00000509680 687 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 TOMM22P4-201ENST00000511318 336 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 RNU6-699P-201ENST00000517081 110 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AL133153.1-201ENST00000557756 303 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AC024619.4-201ENST00000580924 316 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AP001486.3-201ENST00000615334 372 ntBASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ZC3H4Q9UPT8 AL158163.1-201ENST00000603915 1649 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms