Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP000770.2-201ENST00000623694 100 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC093831.2-201ENST00000624393 3427 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SNORD116-23-201ENST00000384645 92 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SNORD15B-201ENST00000384714 146 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SAR1AP2-201ENST00000392696 594 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AL138885.1-201ENST00000405921 675 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 Z80107.1-201ENST00000436830 412 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC108734.1-201ENST00000439549 399 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SSXP4-201ENST00000451349 245 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 RN7SL75P-201ENST00000461926 281 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC011825.1-201ENST00000484967 388 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 RN7SL283P-201ENST00000489055 303 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 POU5F1P7-201ENST00000508759 541 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 MTATP6P9-201ENST00000515039 680 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC106782.4-201ENST00000568264 210 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AL451007.1-201ENST00000595491 289 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 VN1R92P-201ENST00000598511 928 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC006539.2-201ENST00000601729 572 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AL133393.1-201ENST00000603277 287 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC135507.2-201ENST00000612443 309 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 ATP5A1P2-202ENST00000616464 443 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC091046.2-201ENST00000620775 665 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC006963.1-201ENST00000624003 1052 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 OR4G3P-201ENST00000633500 913 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 CU459211.1-201ENST00000635667 749 ntBASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP2Q9UDT6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 MT-TC-201ENST00000387405 66 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 UBA52P6-201ENST00000399822 382 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 RNA5SP56-201ENST00000410277 118 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 TOMM22P1-201ENST00000418578 312 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC104073.1-201ENST00000451988 151 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 MTATP6P14-201ENST00000455189 673 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC068587.2-201ENST00000478386 781 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AL024509.2-201ENST00000493462 493 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 OR5H5P-201ENST00000503164 928 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC109471.1-201ENST00000511631 612 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 PSMA2P1-201ENST00000526365 646 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AP003385.6-201ENST00000531603 374 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC023825.1-201ENST00000566704 1030 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC090772.4-201ENST00000623599 362 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AF117829.1-206ENST00000621883 3802 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 MTND5P24-201ENST00000438892 1767 ntBASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLIP2Q9UDT6 AC004925.1-201ENST00000624256 2706 ntBASIC3.65□□□□□ -1.82
CLIP2Q9UDT6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.65□□□□□ -1.82
CLIP2Q9UDT6 ZNF807-201ENST00000328088 1707 ntBASIC3.65□□□□□ -1.82
CLIP2Q9UDT6 AC002546.1-201ENST00000588041 2504 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 RNU6-50P-201ENST00000362356 103 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 RNU6-251P-201ENST00000363235 104 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 RNU6-839P-201ENST00000363347 108 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 SSR1P2-201ENST00000415208 787 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 SDCBPP3-201ENST00000419629 891 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC092634.2-201ENST00000428146 1010 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 OR2B8P-201ENST00000432841 938 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC011242.1-201ENST00000433596 1158 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AL117351.1-201ENST00000438864 766 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC004022.1-201ENST00000447766 1066 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 HMGN1P5-201ENST00000448591 263 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms