Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 SNORA23-201ENST00000365128 182 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RNU6-128P-201ENST00000383976 107 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RNU6-1106P-201ENST00000390845 107 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RPLP0P7-201ENST00000416050 667 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AL138785.1-201ENST00000425821 331 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RPL23AP33-201ENST00000442301 452 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RPL34P20-201ENST00000442771 351 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RPL12P39-201ENST00000455456 496 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RNU7-167P-201ENST00000459160 62 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 VN1R105P-201ENST00000486595 910 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 RN7SKP295-201ENST00000517264 153 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AC020910.3-201ENST00000603701 874 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 IGHV3-29-201ENST00000604817 344 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 PISRT1.1-201ENST00000616930 107 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AC098657.3-201ENST00000620434 263 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 AL669831.3-213ENST00000636676 183 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 TTC41P-205ENST00000551270 3963 ntBASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CXXC1Q9P0U4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CXXC1Q9P0U4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CXXC1Q9P0U4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CXXC1Q9P0U4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.71□□□□□ -1.49
CXXC1Q9P0U4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CXXC1Q9P0U4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CXXC1Q9P0U4 AC104964.3-201ENST00000606115 2860 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 Y_RNA.133-201ENST00000363428 110 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RNA5SP479-201ENST00000364858 117 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RNU6-196P-201ENST00000384315 107 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RNU6-1105P-201ENST00000384774 107 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AC110754.1-201ENST00000399740 601 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 DDX39BP1-205ENST00000422507 192 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RSL24D1P6-201ENST00000426934 401 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RPL23AP69-201ENST00000431134 458 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AL161722.2-201ENST00000434731 981 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AP000797.2-201ENST00000475768 606 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 PTP4A1P4-201ENST00000512479 322 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 SNORA14.1-201ENST00000516113 141 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RNU6-1095P-201ENST00000516148 108 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RNU6-1016P-201ENST00000516689 94 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 RNU6-677P-201ENST00000516914 101 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AC083806.3-201ENST00000614016 455 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 AL158196.1-201ENST00000616786 434 ntBASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CXXC1Q9P0U4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 RNU6-1309P-201ENST00000363305 108 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 RNU6-1040P-201ENST00000383974 107 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 RNU1-136P-201ENST00000384181 164 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 RNU6-310P-201ENST00000384655 107 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 MIR135A2-201ENST00000384854 100 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 SNORA16.2-201ENST00000390991 127 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 AL358176.2-201ENST00000425769 204 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 RPL7P28-201ENST00000437739 740 ntBASIC5.7□□□□□ -1.5
CXXC1Q9P0U4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms