Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR7154-201ENST00000620673 73 ntBASIC4.65□□□□□ -1.67
DDX56Q9NY93 AC098679.4-201ENST00000624241 654 ntBASIC4.65□□□□□ -1.67
DDX56Q9NY93 AC006065.6-201ENST00000625201 545 ntBASIC4.65□□□□□ -1.67
DDX56Q9NY93 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX56Q9NY93 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX56Q9NY93 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX56Q9NY93 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX56Q9NY93 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX56Q9NY93 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX56Q9NY93 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX56Q9NY93 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX56Q9NY93 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
DDX56Q9NY93 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
DDX56Q9NY93 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX56Q9NY93 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX56Q9NY93 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX56Q9NY93 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC008725.1-201ENST00000605123 2263 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 U8.3-201ENST00000363321 132 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 RNU6-348P-201ENST00000384386 107 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC007537.2-201ENST00000472093 511 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 RPS27AP1-201ENST00000475545 471 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC068305.1-201ENST00000497406 726 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 RNU1-61P-201ENST00000516107 151 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 RNU6-64P-201ENST00000517119 105 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC123904.3-201ENST00000547218 814 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC093012.1-202ENST00000549403 582 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC016180.1-201ENST00000567945 403 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC007599.1-201ENST00000568688 1174 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AL121834.1-201ENST00000572284 509 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC012213.3-201ENST00000577199 777 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 RN7SL690P-201ENST00000582087 240 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AC013244.1-201ENST00000604279 193 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 AL160290.3-201ENST00000604869 165 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 Z98200.1-201ENST00000607298 470 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 MIR6719-201ENST00000622428 87 ntBASIC4.64□□□□□ -1.67
DDX56Q9NY93 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
DDX56Q9NY93 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX56Q9NY93 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX56Q9NY93 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX56Q9NY93 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX56Q9NY93 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX56Q9NY93 OR1S2-201ENST00000302592 978 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 RNU1-15P-201ENST00000353977 144 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 RNU6-1284P-201ENST00000363701 100 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC127391.1-201ENST00000411737 98 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 MTCO3P41-201ENST00000414801 328 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC018630.2-202ENST00000422992 927 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL590383.1-201ENST00000428602 75 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL359265.2-201ENST00000434367 631 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC009961.2-201ENST00000435771 251 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC092473.1-201ENST00000441098 221 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC016696.1-201ENST00000446949 318 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 RAD23BP3-201ENST00000454157 1152 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 HMGN2P16-201ENST00000456802 261 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AC010326.1-201ENST00000462726 602 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 RPS27AP17-201ENST00000463344 455 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL049714.1-201ENST00000466686 347 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 RNU6-390P-201ENST00000516259 103 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 RNU2-10P-201ENST00000516375 211 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 Vault.3-201ENST00000516676 95 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX56Q9NY93 AP000827.1-201ENST00000527814 258 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 CBX3P5-201ENST00000552017 521 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 AL355836.1-201ENST00000555951 870 ntBASIC4.63□□□□□ -1.67
DDX56Q9NY93 MTND6P33-201ENST00000571794 183 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms