Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RNU6-223P-201ENST00000362830 107 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 Y_RNA.248-201ENST00000364501 109 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RNU6-335P-201ENST00000364563 113 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RNU6-456P-201ENST00000384493 107 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AL109755.1-201ENST00000401791 649 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RNU2-43P-201ENST00000410306 190 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 MTCO3P12-201ENST00000416718 547 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC140479.3-201ENST00000418944 1126 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AL139415.2-201ENST00000431968 163 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AL121871.1-201ENST00000443413 436 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC112498.1-201ENST00000444401 332 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 NPM1P49-201ENST00000448027 714 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RN7SL30P-201ENST00000488416 306 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC068305.1-201ENST00000497406 726 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC025445.1-201ENST00000502728 300 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 RN7SKP147-201ENST00000517154 244 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC090572.1-201ENST00000519251 160 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC011979.2-201ENST00000527568 352 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 CBX3P5-201ENST00000552017 521 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 SNRPGP15-201ENST00000600149 222 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AL136313.1-201ENST00000624804 202 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 LINC00622-201ENST00000562811 1570 ntBASIC4.52□□□□□ -1.69
MKS1Q9NXB0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC139769.1-204ENST00000472297 1931 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RPL23P2-201ENST00000320371 421 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 Y_RNA.159-201ENST00000363674 87 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 U3.11-201ENST00000364476 212 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RNU6-108P-201ENST00000365558 107 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 MIR93-201ENST00000385024 80 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 SNORD115-47-201ENST00000391226 86 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 Z98745.1-201ENST00000402553 494 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RN7SKP229-201ENST00000410465 302 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RSU1P3-201ENST00000412878 835 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 MTATP6P30-201ENST00000443540 664 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 HMGN2P21-201ENST00000447764 270 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RPL36AP13-201ENST00000457490 317 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RPS15AP36-201ENST00000492022 382 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC079382.1-201ENST00000493346 557 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC010342.1-201ENST00000514047 877 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RNU6-1178P-201ENST00000516674 107 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RNU6-64P-201ENST00000517119 105 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 IFITM8P-201ENST00000522529 394 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AP003034.1-201ENST00000534621 422 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AL110118.1-201ENST00000553543 400 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 HMGB1P33-201ENST00000563485 527 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.51□□□□□ -1.69
MKS1Q9NXB0 SUMO2P15-201ENST00000604285 278 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AL034351.1-201ENST00000605288 668 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AL109618.2-201ENST00000605527 211 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AL445222.1-201ENST00000607259 628 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AL031666.3-201ENST00000609320 1006 ntBASIC4.51□□□□□ -1.69
MKS1Q9NXB0 AL450472.3-201ENST00000615578 367 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms