Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 Y_RNA.352-201ENST00000365439 102 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 MIR153-1-201ENST00000384914 90 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 MIR105-2-201ENST00000385083 81 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 MIR613-201ENST00000385248 95 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 RNA5SP36-201ENST00000410197 133 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 Y_RNA.793-201ENST00000411222 111 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL139156.1-201ENST00000412785 841 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL645568.3-201ENST00000433683 316 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 ATP5LP2-201ENST00000440646 311 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AC010733.1-201ENST00000451515 401 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 ACA64.1-201ENST00000459171 127 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 TBCAP3-201ENST00000512475 312 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 RNU7-4P-201ENST00000516961 62 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-685P-201ENST00000517088 95 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 FAM60DP-201ENST00000524174 632 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 RANP3-201ENST00000530970 276 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL355812.1-201ENST00000603215 216 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL136228.1-201ENST00000622221 319 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AC091953.5-201ENST00000622919 233 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AL355834.1-201ENST00000556602 3965 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 AC140134.1-201ENST00000511830 3544 ntBASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUEDC1Q9NWM3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC027088.4-201ENST00000611559 1947 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AL121886.1-201ENST00000358609 435 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RNA5SP242-201ENST00000364171 118 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-842P-201ENST00000384269 107 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RN7SKP293-201ENST00000411389 296 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RPL12P18-201ENST00000437175 325 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 SDC4P-201ENST00000453285 601 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 LINC01399-202ENST00000458450 244 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC023141.9-201ENST00000458734 412 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 ACA64.4-201ENST00000459070 127 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 SNORD97-201ENST00000459187 142 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AP001992.1-205ENST00000462248 379 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RPL23AP40-201ENST00000487630 390 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RPS23P1-201ENST00000491662 432 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC093853.1-201ENST00000515689 483 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 HIGD1AP3-201ENST00000515857 278 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 SNORA25.14-201ENST00000516481 132 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-323P-201ENST00000521915 107 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 CYCSP27-201ENST00000527643 293 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 VN1R91P-201ENST00000594377 169 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 MZT1P2-201ENST00000604387 248 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AL162431.4-201ENST00000604674 411 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AC012443.1-201ENST00000605605 231 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 U73479.1-201ENST00000618062 168 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 AL159153.1-201ENST00000619688 317 ntBASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CUEDC1Q9NWM3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUEDC1Q9NWM3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms