Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 FCF1P1-201ENST00000432690 571 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 OR2B8P-201ENST00000432841 938 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 RPL23AP31-201ENST00000456160 467 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC008481.1-201ENST00000463278 396 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL049714.1-201ENST00000466686 347 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 RPS26P28-201ENST00000470806 348 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC091042.1-201ENST00000579213 173 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AF038458.1-201ENST00000588406 262 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL022154.1-201ENST00000604698 785 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL136363.1-201ENST00000605349 337 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 FAM25E-202ENST00000608562 189 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC004696.1-201ENST00000614345 607 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL355810.1-201ENST00000614629 552 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AL158209.2-201ENST00000619266 216 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIN7CQ9NUP9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNU6-181P-201ENST00000363225 107 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 U3.11-201ENST00000364476 212 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNU6-169P-201ENST00000365336 107 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNA5SP22-201ENST00000365393 109 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNU6-648P-201ENST00000410190 107 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC016831.4-201ENST00000438302 307 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL138799.3-201ENST00000438968 350 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 MTCO3P45-201ENST00000443036 613 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC108860.1-201ENST00000484521 383 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 SCARNA22-201ENST00000503991 125 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC010460.1-201ENST00000507087 466 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC091868.1-201ENST00000508746 304 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNA5SP446-201ENST00000515955 82 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNU6-506P-201ENST00000516553 94 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RNU6-445P-201ENST00000516949 107 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 IGKV2D-23-201ENST00000518179 286 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 OR5D17P-201ENST00000531492 978 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AP001880.2-201ENST00000538233 448 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL845331.3-202ENST00000562856 261 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 RN7SL176P-201ENST00000580352 264 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC025165.5-201ENST00000602802 578 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC024940.4-201ENST00000605507 246 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC026368.1-201ENST00000614934 690 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC091905.2-201ENST00000623143 306 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC091905.1-201ENST00000624400 311 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 OR5H6-203ENST00000642105 978 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms