Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MIR4286-201ENST00000580651 93 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 RPL7P50-201ENST00000600588 727 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC055876.5-201ENST00000605667 259 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 AC099669.2-201ENST00000616549 437 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 OR5H6-203ENST00000642105 978 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.82□□□□□ -1.64
VTA1Q9NP79 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTA1Q9NP79 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VTA1Q9NP79 NMD3P1-201ENST00000439704 1488 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTA1Q9NP79 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTA1Q9NP79 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTA1Q9NP79 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTA1Q9NP79 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTA1Q9NP79 RNU6-837P-201ENST00000391056 108 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 DPPA2P1-201ENST00000428060 556 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 UBE2V1P8-201ENST00000437166 265 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 HMGB3P9-201ENST00000441799 583 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL162151.2-201ENST00000448875 158 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC012170.1-201ENST00000495139 359 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 Vault.3-201ENST00000516676 95 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AP000907.2-201ENST00000530827 353 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC124947.2-202ENST00000552735 133 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 HMGB3P26-201ENST00000560051 582 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC006130.2-201ENST00000586202 326 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL451044.1-201ENST00000604867 238 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC090517.2-201ENST00000614966 680 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL158209.2-201ENST00000619266 216 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTA1Q9NP79 AL356489.2-201ENST00000566968 3528 ntBASIC4.81□□□□□ -1.64
VTA1Q9NP79 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.81□□□□□ -1.64
VTA1Q9NP79 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 CIR1P3-201ENST00000405137 479 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 RPL21P65-201ENST00000406094 466 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 HMGN1P24-201ENST00000412282 298 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 MTND3P17-201ENST00000416968 344 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC233728.2-201ENST00000425348 757 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC093156.1-201ENST00000440382 670 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 MTND1P12-201ENST00000455231 147 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 RNA5SP246-201ENST00000458909 119 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 RBM43P1-201ENST00000476891 1081 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 RNU6-314P-201ENST00000516574 104 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VTA1Q9NP79 MTCYBP41-201ENST00000528913 1123 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC107954.1-201ENST00000565906 727 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.8□□□□□ -1.64
VTA1Q9NP79 AC060771.1-201ENST00000582031 164 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 IGHV3-29-201ENST00000604817 344 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AL161734.1-201ENST00000609720 557 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AL590099.1-201ENST00000615276 138 ntBASIC4.8□□□□□ -1.64
VTA1Q9NP79 AL158196.1-201ENST00000616786 434 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms