Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 Y_RNA.445-201ENST00000384168 102 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 Z82205.1-201ENST00000428456 297 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC016831.4-201ENST00000438302 307 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 MTND3P2-201ENST00000438452 342 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 VN1R17P-201ENST00000472048 1090 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC083904.1-201ENST00000487828 231 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 HMGB3P15-201ENST00000507326 574 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 RNA5SP464-201ENST00000516251 108 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 RNU6-798P-201ENST00000516912 103 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 Y_RNA.711-201ENST00000516993 102 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 MIR4703-201ENST00000577728 79 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 MIR3160-1-201ENST00000577972 85 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC008737.2-201ENST00000599446 118 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AL627309.6-201ENST00000606857 840 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 AL122125.1-201ENST00000616999 600 ntBASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
ZFYVE28Q9HCC9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZFYVE28Q9HCC9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZFYVE28Q9HCC9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
ZFYVE28Q9HCC9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.71□□□□□ -1.49
ZFYVE28Q9HCC9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 MTCO1P12-201ENST00000414273 1543 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RNU6-179P-201ENST00000363350 107 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.144-201ENST00000363521 113 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 SNORD113.2-201ENST00000364166 89 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 U3.12-201ENST00000364498 214 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 SNORD116-29-201ENST00000384516 83 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RPL12P34-201ENST00000424532 479 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AL732292.1-201ENST00000426692 226 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RPL23AP43-201ENST00000446445 471 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AL118520.1-201ENST00000450770 291 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC107399.1-201ENST00000451226 265 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RNU7-180P-201ENST00000459240 63 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RPL23AP56-201ENST00000460778 453 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC079804.1-201ENST00000461922 436 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC012181.1-201ENST00000479895 423 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC026402.1-201ENST00000513642 170 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.682-201ENST00000516457 100 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 DEFB109D-201ENST00000529497 240 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC006270.2-201ENST00000578523 652 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 RNF138P2-201ENST00000603490 592 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AL592436.1-201ENST00000605135 558 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 MIR6716-201ENST00000613413 80 ntBASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZFYVE28Q9HCC9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 RNA5SP223-201ENST00000365174 120 ntBASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.459-201ENST00000384251 102 ntBASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 RNY4P36-201ENST00000391116 96 ntBASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 AC114755.2-201ENST00000413520 361 ntBASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 RPS3AP52-201ENST00000435639 297 ntBASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 PRPS1P1-201ENST00000445305 876 ntBASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.7□□□□□ -1.5
ZFYVE28Q9HCC9 AC002553.2-201ENST00000453217 340 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms