Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
RNF39Q9H2S5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 DYNLT3P1-201ENST00000378574 347 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 Y_RNA.415-201ENST00000384012 112 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 SNORA26-201ENST00000391286 122 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 RN7SKP148-201ENST00000410179 275 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 RN7SL790P-201ENST00000474043 298 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AC093259.1-201ENST00000509755 300 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 SNORA43.2-201ENST00000516652 128 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 RNY4P20-201ENST00000516678 93 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 AL355333.1-201ENST00000605632 279 ntBASIC7.7□□□□□ -1.18
RNF39Q9H2S5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF39Q9H2S5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 SNORA66-201ENST00000384792 133 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 MIR549A-201ENST00000385268 96 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 MT-TI-201ENST00000387365 69 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AL078599.1-201ENST00000402075 293 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AL139281.1-201ENST00000422120 335 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC083855.1-201ENST00000440041 258 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AL078601.1-201ENST00000444542 271 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC006026.2-201ENST00000457376 180 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 RNU6-437P-201ENST00000459408 95 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC007215.1-201ENST00000464893 276 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC105137.1-201ENST00000484355 562 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 RN7SL267P-201ENST00000485107 261 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC066616.1-201ENST00000486795 413 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 SNORA31.22-201ENST00000517204 135 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AP003357.1-201ENST00000604497 148 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC131238.1-201ENST00000617135 328 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 MIR6864-201ENST00000617935 70 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 FAS-AS1.2-201ENST00000620386 170 ntBASIC7.69□□□□□ -1.18
RNF39Q9H2S5 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF39Q9H2S5 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AC116096.1-201ENST00000566804 2314 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 AL133383.2-201ENST00000622958 2336 ntBASIC7.68□□□□□ -1.18
RNF39Q9H2S5 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF39Q9H2S5 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms