Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FCF1P1-201ENST00000432690 571 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.4□□□□□ -1.71
SMOQ99835 HMGB1P31-201ENST00000437242 427 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 AC068587.1-201ENST00000483613 781 ntBASIC4.4□□□□□ -1.71
SMOQ99835 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.4□□□□□ -1.71
SMOQ99835 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.4□□□□□ -1.71
SMOQ99835 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.4□□□□□ -1.71
SMOQ99835 MTCO1P35-201ENST00000515270 228 ntBASIC4.4□□□□□ -1.71
SMOQ99835 HMGB1P19-201ENST00000517578 577 ntBASIC4.4□□□□□ -1.71
SMOQ99835 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.4□□□□□ -1.71
SMOQ99835 OR5AQ1P-201ENST00000527596 927 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.4□□□□□ -1.71
SMOQ99835 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.4□□□□□ -1.71
SMOQ99835 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.4□□□□□ -1.71
SMOQ99835 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 AC004067.1-201ENST00000608733 700 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AL355472.4-201ENST00000610233 626 ntBASIC4.4□□□□□ -1.71
SMOQ99835 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.71
SMOQ99835 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
SMOQ99835 MIR7151-201ENST00000617477 60 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AL596245.1-201ENST00000618994 362 ntBASIC4.4□□□□□ -1.71
SMOQ99835 AC068724.3-201ENST00000625906 87 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RNA5SP196-201ENST00000625967 102 ntBASIC4.4□□□□□ -1.71
SMOQ99835 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
SMOQ99835 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMOQ99835 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 AC026951.1-201ENST00000559530 2459 ntBASIC4.4□□□□□ -1.71
SMOQ99835 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMOQ99835 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SMOQ99835 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SMOQ99835 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMOQ99835 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMOQ99835 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SMOQ99835 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMOQ99835 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.39□□□□□ -1.71
SMOQ99835 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
SMOQ99835 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 MTND5P33-201ENST00000571250 1450 ntBASIC4.39□□□□□ -1.71
SMOQ99835 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SMOQ99835 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 NUP58P1-201ENST00000502546 1738 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC114546.3-201ENST00000623582 1734 ntBASIC4.39□□□□□ -1.71
SMOQ99835 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 Y_RNA.1-201ENST00000352915 104 ntBASIC4.39□□□□□ -1.71
SMOQ99835 RNA5SP130-201ENST00000364431 114 ntBASIC4.39□□□□□ -1.71
SMOQ99835 Y_RNA.453-201ENST00000384223 109 ntBASIC4.39□□□□□ -1.71
SMOQ99835 Y_RNA.548-201ENST00000384656 105 ntBASIC4.39□□□□□ -1.71
SMOQ99835 RNU11-4P-201ENST00000391149 133 ntBASIC4.39□□□□□ -1.71
SMOQ99835 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 AC004987.3-201ENST00000413879 771 ntBASIC4.39□□□□□ -1.71
SMOQ99835 RPS23P10-201ENST00000416185 486 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 ELOCP14-201ENST00000428070 331 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.39□□□□□ -1.71
SMOQ99835 RPL23AP46-201ENST00000438548 490 ntBASIC4.39□□□□□ -1.71
SMOQ99835 ELOCP7-201ENST00000439968 331 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC114755.5-201ENST00000447760 831 ntBASIC4.39□□□□□ -1.71
SMOQ99835 RPL7P52-201ENST00000449200 742 ntBASIC4.39□□□□□ -1.71
SMOQ99835 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
SMOQ99835 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.39□□□□□ -1.71
SMOQ99835 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.39□□□□□ -1.71
SMOQ99835 AC105914.1-201ENST00000511798 226 ntBASIC4.39□□□□□ -1.71
SMOQ99835 RN7SKP277-201ENST00000516895 283 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.39□□□□□ -1.71
SMOQ99835 AC118273.2-201ENST00000532092 465 ntBASIC4.39□□□□□ -1.71
SMOQ99835 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.39□□□□□ -1.71
SMOQ99835 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.39□□□□□ -1.71
SMOQ99835 HMGB1P33-201ENST00000563485 527 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC007224.1-201ENST00000564410 144 ntBASIC4.39□□□□□ -1.71
SMOQ99835 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 MIR3118-1-201ENST00000581787 76 ntBASIC4.39□□□□□ -1.71
SMOQ99835 MIR4512-201ENST00000583257 77 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 UBE2L4-201ENST00000587688 464 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.39□□□□□ -1.71
SMOQ99835 AL391646.1-201ENST00000603860 190 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC011468.4-201ENST00000603942 409 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AL357078.3-201ENST00000607528 618 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AC104458.1-201ENST00000608243 463 ntBASIC4.39□□□□□ -1.71
SMOQ99835 BX664608.1-201ENST00000610519 487 ntBASIC4.39□□□□□ -1.71
SMOQ99835 AL158801.5-201ENST00000623123 465 ntBASIC4.39□□□□□ -1.71
SMOQ99835 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
SMOQ99835 SAGE4P-201ENST00000442271 3381 ntBASIC4.39□□□□□ -1.71
SMOQ99835 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.39□□□□□ -1.71
SMOQ99835 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SMOQ99835 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMOQ99835 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
SMOQ99835 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms