Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC010329.2-201ENST00000595195 2737 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC103710.2-202ENST00000641454 2853 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AL731556.1-201ENST00000394628 3711 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.76-201ENST00000362931 109 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RNU1-106P-201ENST00000384382 164 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 SNORA16.2-201ENST00000390991 127 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RPL30P2-201ENST00000414021 291 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AL358176.3-201ENST00000420757 454 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 PSMA2P3-201ENST00000429685 675 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 HMGB3P24-201ENST00000433260 622 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 TDGF1P1-201ENST00000445734 527 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RNU7-167P-201ENST00000459160 62 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC104164.1-201ENST00000460282 590 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RPL23AP64-201ENST00000469465 435 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC020890.1-201ENST00000491837 504 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AL139099.1-201ENST00000497398 403 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC006023.2-201ENST00000609916 167 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AL118522.2-201ENST00000616045 615 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AP002799.1-201ENST00000623552 423 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC006484.1-201ENST00000435086 1884 ntBASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC090740.1-201ENST00000623193 2262 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RN7SKP128-201ENST00000364270 303 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.383-201ENST00000383855 97 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RPL35AP3-201ENST00000414680 288 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AL353997.1-201ENST00000432936 108 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AL645568.3-201ENST00000433683 316 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 CRYGGP-201ENST00000443337 145 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RNU7-169P-201ENST00000459456 61 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC087477.1-201ENST00000465747 340 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RN7SL165P-201ENST00000477476 291 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RPL7P23-201ENST00000493874 747 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC008897.1-201ENST00000494006 347 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AP001086.1-201ENST00000494882 321 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RPL7P47-201ENST00000497299 556 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-919P-201ENST00000516731 104 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.713-201ENST00000517013 96 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 PARP1P2-201ENST00000556806 195 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC209154.1-201ENST00000582156 337 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-156P-201ENST00000621869 107 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AC004656.1-201ENST00000568479 4951 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AL445437.1-201ENST00000623157 3087 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 AL606537.1-201ENST00000607258 2011 ntBASIC5.69□□□□□ -1.5
CNTNAP3BQ96NU0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms