Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AL158050.2-201ENST00000605336 568 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC097504.2-201ENST00000608088 454 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MIR3651-201ENST00000630427 90 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 CDR1-202ENST00000625883 1485 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 SNRPEP3-201ENST00000338402 276 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RNU5D-1-201ENST00000363299 116 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AL450338.1-201ENST00000407987 512 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RNU4-65P-201ENST00000410473 140 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AL161449.1-201ENST00000414531 1199 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 GLRXP1-201ENST00000423261 334 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 PSMA6P3-201ENST00000428242 164 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 EZH2P1-201ENST00000431167 291 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RPL39P6-201ENST00000448289 150 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 MTATP6P14-201ENST00000455189 673 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC087312.1-201ENST00000471411 480 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RPL23AP44-201ENST00000482216 473 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 OR4G11P-201ENST00000492842 939 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RNU1-61P-201ENST00000516107 151 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RNU6-1095P-201ENST00000516148 108 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AP001207.2-201ENST00000519490 539 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC006518.1-201ENST00000541449 943 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 HSPE1P3-201ENST00000559254 309 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 RPL21P12-201ENST00000559810 515 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 MIR5004-201ENST00000579078 107 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AL161756.2-201ENST00000604597 246 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC016877.3-201ENST00000606778 504 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AL355810.1-201ENST00000614629 552 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC084824.4-201ENST00000620106 731 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC099654.8-201ENST00000637757 681 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
ZNF560Q96MR9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF560Q96MR9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 RNU6-1074P-201ENST00000383995 104 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AL449283.1-202ENST00000418249 604 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 GTF2IP23-201ENST00000423746 351 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AL512649.1-201ENST00000428997 581 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 RPL23AP83-201ENST00000434984 473 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC092427.1-201ENST00000439177 601 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 NECAP1P2-201ENST00000455668 727 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 FCF1P6-201ENST00000456841 595 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC092754.2-201ENST00000463506 460 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 MTND3P3-201ENST00000505004 126 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 PHBP14-201ENST00000512887 367 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC104986.1-201ENST00000517978 436 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC004024.1-201ENST00000549244 247 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 HIGD1AP17-201ENST00000554576 276 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 OR4T1P-201ENST00000554933 911 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AL845331.3-202ENST00000562856 261 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 MIR4637-201ENST00000582405 84 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms