Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MTATP6P18-201ENST00000417994 673 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AL590233.1-201ENST00000430017 456 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 HMGB3P12-201ENST00000438745 556 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 RPS20P32-201ENST00000456044 356 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 snoU13.7-201ENST00000459220 104 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC011005.3-201ENST00000491624 395 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC010587.1-201ENST00000505809 469 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 PPBPP1-201ENST00000510807 373 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 RNU6-835P-201ENST00000516974 104 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AP003072.2-201ENST00000527756 676 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 HIF1AP1-201ENST00000553642 175 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC034105.4-201ENST00000568304 277 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 NRBF2P5-201ENST00000603087 788 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 RPL23AP92-201ENST00000603609 255 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC128687.2-201ENST00000609657 566 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AL356585.4-201ENST00000623078 1229 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC024614.3-201ENST00000637860 256 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 NMD3P1-201ENST00000439704 1488 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MTND5P17-201ENST00000418405 1603 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RNU6-1243P-201ENST00000364028 107 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RNU6-169P-201ENST00000365336 107 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 SNORA37-201ENST00000384504 129 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RNU6-878P-201ENST00000384578 110 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MT-TD-201ENST00000387419 68 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RPL31P1-201ENST00000398116 372 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MIR1911-201ENST00000410783 80 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RPS20P14-201ENST00000412545 360 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RPS12P10-201ENST00000427031 377 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 Z95327.1-201ENST00000446082 482 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 EEF1A1P1-201ENST00000447052 739 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AP1S2P1-201ENST00000457344 379 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 APOOP2-201ENST00000461561 539 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC083798.1-201ENST00000472671 131 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC079382.1-201ENST00000493346 557 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC108022.1-201ENST00000493466 478 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC139783.2-201ENST00000504847 1145 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC111000.3-201ENST00000508057 576 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 LRRC34P2-201ENST00000514850 553 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 HMGB1P19-201ENST00000517578 577 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 RPL23AP97-201ENST00000568955 471 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC091042.1-201ENST00000579213 173 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 VN1R85P-201ENST00000601587 426 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 BPIFA4P-203ENST00000603168 689 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AC006504.8-201ENST00000621046 635 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 AL118496.1-201ENST00000440201 1812 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 MFSD8-216ENST00000641147 4009 ntBASIC5.13□□□□□ -1.59
CHAMP1Q96JM3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AL592148.3-201ENST00000608771 2646 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 RNU6-28P-201ENST00000362378 107 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 RNU6-359P-201ENST00000365466 108 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 Y_RNA.381-201ENST00000365666 102 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 RNU6-1011P-201ENST00000384668 107 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 SNORD66.1-201ENST00000391230 76 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 RPL31P45-201ENST00000419532 356 ntBASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.12□□□□□ -1.59
CHAMP1Q96JM3 AC092832.1-201ENST00000422934 400 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms