Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.44□□□□□ -1.38
LRCH3Q96II8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LRCH3Q96II8 AC093849.1-201ENST00000563631 2209 ntBASIC6.44□□□□□ -1.38
LRCH3Q96II8 AL731556.1-201ENST00000394628 3711 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 RNA5SP183-201ENST00000362452 119 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 RNU6-595P-201ENST00000363944 107 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 U8.8-201ENST00000365399 135 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC016739.1-201ENST00000405359 345 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 AL513475.1-201ENST00000406602 315 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 RN7SKP27-201ENST00000410684 333 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 AP001324.2-201ENST00000461163 319 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 RN7SL481P-201ENST00000477764 299 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 RN7SL459P-201ENST00000481078 302 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC106800.3-201ENST00000511389 308 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 IGKV1D-22-201ENST00000518953 324 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC007458.1-201ENST00000542812 373 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 OR1M4P-201ENST00000589199 287 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC007998.5-201ENST00000622938 237 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC243829.7-201ENST00000633081 225 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 AC010168.2-201ENST00000562691 5428 ntBASIC6.43□□□□□ -1.38
LRCH3Q96II8 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.43□□□□□ -1.38
LRCH3Q96II8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LRCH3Q96II8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC004158.1-201ENST00000564508 4319 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 U3.13-201ENST00000364804 214 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 Y_RNA.441-201ENST00000384123 112 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 RNU6-933P-201ENST00000384424 107 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 AL033519.2-201ENST00000403958 392 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 SSXP4-201ENST00000451349 245 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 RANP2-201ENST00000456833 229 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC134698.5-201ENST00000519444 336 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC090151.1-201ENST00000520784 730 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 IGLV3-6-201ENST00000523937 250 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 BNIP3P1-201ENST00000547295 580 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC120057.2-201ENST00000571520 271 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 ZNF658B-201ENST00000602828 3408 ntBASIC6.42□□□□□ -1.38
LRCH3Q96II8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
LRCH3Q96II8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
LRCH3Q96II8 AC092724.1-201ENST00000624623 3397 ntBASIC6.41□□□□□ -1.38
LRCH3Q96II8 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms