Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HLA-CQ95604 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.15□□□□□ -1.43
HLA-CQ95604 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-CQ95604 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-CQ95604 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-CQ95604 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HLA-CQ95604 AL672167.1-205ENST00000641112 3080 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 Z75746.1-201ENST00000440243 2080 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-CQ95604 LINC01963-201ENST00000562038 3148 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-CQ95604 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-CQ95604 FAM91A3P-201ENST00000456826 2544 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-CQ95604 RNA5SP305-201ENST00000362665 119 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-CQ95604 AC019155.1-201ENST00000382242 574 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 BX842559.1-201ENST00000419615 532 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AL133173.1-201ENST00000423458 397 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AC016712.1-201ENST00000431088 378 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 RPS11P7-201ENST00000442125 465 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-CQ95604 AL513124.1-201ENST00000450410 614 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AC133134.1-201ENST00000466800 359 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-CQ95604 SNORA58-201ENST00000505219 137 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-CQ95604 TRAV32-201ENST00000553993 340 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 MIR5696-201ENST00000578474 85 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 RNU4ATAC-201ENST00000580972 127 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-CQ95604 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-CQ95604 AC073410.2-201ENST00000603240 332 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 MIR15A-201ENST00000607334 83 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AC074140.1-201ENST00000621617 208 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AL450472.1-202ENST00000637286 180 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-CQ95604 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 AP000756.2-201ENST00000624168 2567 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HLA-CQ95604 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 PHKBP1-201ENST00000450951 1951 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 AC022164.1-201ENST00000568767 2673 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
HLA-CQ95604 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 AL359893.1-201ENST00000447628 1580 ntBASIC6.14□□□□□ -1.43
HLA-CQ95604 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-CQ95604 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
HLA-CQ95604 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 AC109446.4-201ENST00000623235 2755 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-CQ95604 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-CQ95604 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 Y_RNA.54-201ENST00000362766 105 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 RNU6-595P-201ENST00000363944 107 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 SNORD50B-201ENST00000364995 70 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.13□□□□□ -1.43
HLA-CQ95604 RNU6-1081P-201ENST00000384537 107 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 RPL29P29-201ENST00000448725 423 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 TPT1P13-201ENST00000449760 499 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 RPS18P6-201ENST00000476880 458 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 RPL30P10-201ENST00000488148 337 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-CQ95604 DEFB108E-201ENST00000524692 240 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-CQ95604 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-CQ95604 MIR548AC-201ENST00000585049 88 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 AL158827.2-201ENST00000602494 330 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 AL121917.1-203ENST00000605534 577 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 AL691447.3-201ENST00000635020 330 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 SAMMSON-213ENST00000641336 1521 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HLA-CQ95604 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-CQ95604 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 AP001541.1-201ENST00000623322 1904 ntBASIC6.13□□□□□ -1.43
HLA-CQ95604 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-CQ95604 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-CQ95604 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-CQ95604 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms