Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.81□□□□□ -1
TRIM41Q8WV44 AC107016.1-201ENST00000550463 337 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 LSM6P2-201ENST00000552208 177 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.81□□□□□ -1
TRIM41Q8WV44 AC124068.1-201ENST00000563131 678 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 MIR4691-201ENST00000583764 85 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 AC092747.3-201ENST00000603769 301 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 AC011626.1-201ENST00000604710 562 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
TRIM41Q8WV44 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM41Q8WV44 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC8.81□□□□□ -1
TRIM41Q8WV44 MTND5P28-201ENST00000438005 1594 ntBASIC8.81□□□□□ -1
TRIM41Q8WV44 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM41Q8WV44 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC8.81□□□□□ -1
TRIM41Q8WV44 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC8.81□□□□□ -1
TRIM41Q8WV44 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM41Q8WV44 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TRIM41Q8WV44 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 MAX-203ENST00000341653 330 ntTSL 2 BASIC8.8□□□□□ -1
TRIM41Q8WV44 SNORA71.3-201ENST00000362582 128 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 Y_RNA.167-201ENST00000363735 109 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 MIR589-201ENST00000385238 99 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 RN7SKP100-201ENST00000411258 284 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 OFD1P1Y-201ENST00000411756 1225 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC8.8□□□□□ -1
TRIM41Q8WV44 MTND1P17-201ENST00000448961 204 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 RN7SL542P-201ENST00000467147 294 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 AC092451.1-201ENST00000480211 153 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC8.8□□□□□ -1
TRIM41Q8WV44 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC8.8□□□□□ -1
TRIM41Q8WV44 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC8.8□□□□□ -1
TRIM41Q8WV44 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.8□□□□□ -1
TRIM41Q8WV44 AC020634.1-201ENST00000608701 549 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.8□□□□□ -1
TRIM41Q8WV44 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TRIM41Q8WV44 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.8□□□□□ -1
TRIM41Q8WV44 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
TRIM41Q8WV44 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TRIM41Q8WV44 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.8□□□□□ -1
TRIM41Q8WV44 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM41Q8WV44 RNU11-201ENST00000387069 134 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 RNU6-316P-201ENST00000391027 107 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 RAC1P6-201ENST00000423911 575 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 RPL37P1-201ENST00000432310 284 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 RPS29P10-201ENST00000439197 166 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 AC068781.1-201ENST00000488231 618 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC8.79□□□□□ -1
TRIM41Q8WV44 RN7SKP40-201ENST00000517211 242 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC8.79□□□□□ -1
TRIM41Q8WV44 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.79□□□□□ -1
TRIM41Q8WV44 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC8.79□□□□□ -1
TRIM41Q8WV44 AL360012.1-201ENST00000602813 131 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 ATP1B3P1-201ENST00000605365 821 ntBASIC8.79□□□□□ -1
TRIM41Q8WV44 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC8.79□□□□□ -1
TRIM41Q8WV44 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM41Q8WV44 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.79□□□□□ -1
TRIM41Q8WV44 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.79□□□□□ -1
TRIM41Q8WV44 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
TRIM41Q8WV44 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM41Q8WV44 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
TRIM41Q8WV44 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC8.79□□□□□ -1
TRIM41Q8WV44 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM41Q8WV44 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM41Q8WV44 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM41Q8WV44 AL139276.1-201ENST00000311910 1001 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 RNA5SP453-201ENST00000362503 119 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 RNU6-97P-201ENST00000363387 104 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 RNU6-1062P-201ENST00000383908 107 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 MIR649-201ENST00000384843 97 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC8.78□□□□□ -1
TRIM41Q8WV44 PRRC2CP1-201ENST00000404428 159 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
TRIM41Q8WV44 MED13P1-201ENST00000428342 171 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC8.78□□□□□ -1
TRIM41Q8WV44 AC090804.1-201ENST00000448870 490 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC8.78□□□□□ -1
TRIM41Q8WV44 AC105031.1-201ENST00000518550 476 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC8.78□□□□□ -1
TRIM41Q8WV44 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC8.78□□□□□ -1
TRIM41Q8WV44 AC022882.1-201ENST00000532142 501 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC8.78□□□□□ -1
TRIM41Q8WV44 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.78□□□□□ -1
TRIM41Q8WV44 UBE2L4-201ENST00000587688 464 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 AC104695.3-201ENST00000604052 296 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 AL354984.3-201ENST00000604803 325 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.78□□□□□ -1
TRIM41Q8WV44 AC008013.2-202ENST00000637965 364 ntBASIC8.78□□□□□ -1
TRIM41Q8WV44 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM41Q8WV44 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM41Q8WV44 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC8.78□□□□□ -1
TRIM41Q8WV44 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms