Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 RPS3AP12-201ENST00000443616 753 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 RPL39P40-201ENST00000445481 146 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 NAP1L1P3-201ENST00000462291 880 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 CAB39P1-201ENST00000502277 460 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC087272.1-201ENST00000523624 533 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 MED28P6-201ENST00000558776 231 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC034105.3-201ENST00000565294 442 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC074051.3-201ENST00000570238 358 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 MIR5004-201ENST00000579078 107 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL137843.1-201ENST00000605078 385 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL161734.1-201ENST00000609720 557 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL359198.2-201ENST00000611836 194 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 MIR1264-201ENST00000616374 69 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AC110079.1-202ENST00000635213 138 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 MIR6733-201ENST00000635723 61 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 ZNF519P1-201ENST00000449011 1626 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL035425.3-201ENST00000564206 4996 ntBASIC2.78□□□□□ -1.97
CLHC1Q8NHS4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 NACA3P-201ENST00000359690 648 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 RNA5SP374-201ENST00000362939 125 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 RNU6-173P-201ENST00000364215 104 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 RNA5SP387-201ENST00000364226 106 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 MIR627-201ENST00000384979 97 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AL035410.1-201ENST00000427409 427 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC093422.3-201ENST00000428506 305 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 MTND3P4-201ENST00000453537 303 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 BX248409.1-201ENST00000455497 255 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 BX510359.1-201ENST00000456973 237 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 RPS20P24-201ENST00000457473 361 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 RPS3AP43-201ENST00000479743 781 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 OR2A20P-203ENST00000498397 1268 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 FAM60DP-201ENST00000524174 632 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 VN1R88P-201ENST00000596787 292 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 BNIP3P11-201ENST00000603878 563 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.77□□□□□ -1.97
CLHC1Q8NHS4 AC025263.3-201ENST00000622965 1396 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 ASNSP3-201ENST00000451989 1306 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 RNU6-883P-201ENST00000384597 107 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 HMGN2P35-201ENST00000412164 270 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 EZH2P1-201ENST00000431167 291 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 AC093156.1-201ENST00000440382 670 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 RPS27AP9-201ENST00000477681 438 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 RN7SKP40-201ENST00000517211 242 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 MTCO1P47-201ENST00000523889 1271 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 AC004217.3-201ENST00000551552 878 ntBASIC2.76□□□□□ -1.97
CLHC1Q8NHS4 ATP5F1P7-201ENST00000567330 760 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms