Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 OFD1P18Y-201ENST00000420889 959 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MTCO2P16-201ENST00000436962 677 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 LARP1BP3-201ENST00000437229 869 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC127537.2-201ENST00000439258 465 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AL831737.1-201ENST00000441288 271 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MTND5P14-201ENST00000441481 1267 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MTND4LP3-201ENST00000468320 276 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 RPL31P50-201ENST00000471002 296 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 OR5H5P-201ENST00000503164 928 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 RNU1-95P-201ENST00000516357 160 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 RNU1-128P-201ENST00000516704 160 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC022861.1-201ENST00000522981 663 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 CENPUP2-201ENST00000555897 1186 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AL031775.1-201ENST00000607014 887 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC107214.2-201ENST00000608204 634 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC139792.2-201ENST00000624218 587 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 ZNF285B-201ENST00000561698 1767 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MTND4P16-201ENST00000466108 1367 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 RNU4-21P-201ENST00000362802 126 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 RNU6-501P-201ENST00000364072 100 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 Y_RNA.318-201ENST00000365131 97 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AL359837.1-201ENST00000381357 287 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 RNU6-878P-201ENST00000384578 110 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 MIR153-1-201ENST00000384914 90 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 MIR200C-201ENST00000384980 68 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 HSPE1P8-201ENST00000406997 288 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 HMGB1P11-201ENST00000413899 637 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC012065.2-201ENST00000421295 375 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC092832.1-201ENST00000422934 400 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 GLRXP1-201ENST00000423261 334 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AL512649.1-201ENST00000428997 581 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 MTCO1P27-201ENST00000448269 226 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC005297.2-201ENST00000450430 606 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC087312.1-201ENST00000471411 480 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC012170.1-201ENST00000495139 359 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 OR2A20P-203ENST00000498397 1268 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 MTCO3P44-201ENST00000510977 541 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 MTND5P4-201ENST00000514978 288 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 RNA5SP309-201ENST00000516670 106 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 COX6CP8-201ENST00000522620 226 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC068587.4-201ENST00000533893 186 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 OR8L1P-201ENST00000534005 955 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 GTF2IP22-201ENST00000554443 182 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AL357080.1-201ENST00000617394 239 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AL445264.1-201ENST00000621719 171 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 C2orf27A-204ENST00000623058 969 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 AC091905.1-201ENST00000624400 311 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 NUP58P1-201ENST00000502546 1738 ntBASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH20Q8N6Y1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.81
PCDH20Q8N6Y1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PCDH20Q8N6Y1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
PCDH20Q8N6Y1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDH20Q8N6Y1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms