Protein–RNA interactions for Protein: Q8N1G4

LRRC47, Leucine-rich repeat-containing protein 47, humanhuman

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47Q8N1G4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 NMD3P1-201ENST00000439704 1488 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU5A-8P-201ENST00000364102 114 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU1-132P-201ENST00000364300 164 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU6-1322P-201ENST00000364309 107 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNY3P13-201ENST00000365542 102 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU1-39P-201ENST00000383897 165 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 MIR19A-201ENST00000384878 82 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC137499.1-201ENST00000427602 88 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 GPR143P-201ENST00000434155 205 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 TPT1P14-201ENST00000448018 505 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 NUTF2P3-201ENST00000448540 384 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 IFNWP4-201ENST00000453148 294 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RAD23BP3-201ENST00000454157 1152 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU6-420P-201ENST00000458780 107 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 ST13P14-201ENST00000474095 734 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC117522.1-201ENST00000509821 380 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC017037.2-201ENST00000513850 890 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU6-358P-201ENST00000516564 75 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 RNU6-798P-201ENST00000516912 103 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC104383.1-201ENST00000530297 370 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AL359212.1-201ENST00000556608 614 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 COX6CP3-201ENST00000580869 223 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC025449.1-201ENST00000603896 529 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AL049634.3-201ENST00000604968 457 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 uc_338.12-201ENST00000616344 181 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 uc_338.13-201ENST00000618243 179 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AL445567.2-201ENST00000618935 498 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC002550.2-201ENST00000621246 394 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC091905.2-201ENST00000623143 306 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 AC068724.3-201ENST00000625906 87 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 MIR3662-201ENST00000637030 95 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 ZNF33CP-201ENST00000432492 2030 ntBASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRC47Q8N1G4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AL158163.1-201ENST00000603915 1649 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 Y_RNA.38-201ENST00000362617 102 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 Y_RNA.70-201ENST00000362886 110 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 RNU6-263P-201ENST00000363811 107 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC019155.1-201ENST00000382242 574 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 SNORA70E-201ENST00000384492 135 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 MT-TL1-201ENST00000386347 75 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC097374.1-203ENST00000400783 485 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 RNU2-47P-201ENST00000410649 186 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC005517.2-201ENST00000424673 553 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 RN7SL41P-201ENST00000476144 297 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC025465.4-201ENST00000513422 638 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 RN7SL435P-201ENST00000584418 282 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 IPO5P1-202ENST00000600039 287 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AL162413.1-201ENST00000603198 110 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC079587.1-201ENST00000603846 277 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AL354984.3-201ENST00000604803 325 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AP003117.2-201ENST00000606010 545 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC007038.2-201ENST00000608095 740 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 AC140479.6-201ENST00000633535 357 ntBASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC47Q8N1G4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms