Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 SNORA32.2-201ENST00000384049 122 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 RNU6-1160P-201ENST00000384546 104 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 MIR548P-201ENST00000408336 84 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC119751.6-201ENST00000416712 186 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC011753.3-201ENST00000443436 406 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC010631.1-201ENST00000474150 156 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC008897.1-201ENST00000494006 347 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 VN1R104P-201ENST00000505115 1009 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 OR7H2P-201ENST00000513483 306 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 RNA5SP43-201ENST00000516559 110 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC107953.1-201ENST00000522216 297 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 MTND4P7-201ENST00000523876 130 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC103843.2-201ENST00000530523 682 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 AC090617.10-201ENST00000624308 134 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPAS4Q8IUM7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC139769.1-204ENST00000472297 1931 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 SNORA24.1-201ENST00000384401 135 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 MIR514A2-201ENST00000385131 88 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 MIR514A3-201ENST00000385132 88 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 MIR559-201ENST00000385188 96 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 SSXP9-201ENST00000417503 292 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC090774.1-201ENST00000435925 246 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 BTF3P12-201ENST00000519620 469 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 SUMO2P20-201ENST00000520803 283 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AP005435.4-201ENST00000529514 284 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 OR4H12P-201ENST00000556269 907 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC006116.10-201ENST00000591836 581 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 RNU6-89P-201ENST00000606519 100 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AP001521.2-201ENST00000608772 546 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC007998.5-201ENST00000622938 237 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 AC011155.2-201ENST00000623202 216 ntBASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPAS4Q8IUM7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 AL359922.3-201ENST00000624779 1670 ntBASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 AC004817.4-201ENST00000602396 3625 ntBASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 Y_RNA.184-201ENST00000363884 108 ntBASIC5.53□□□□□ -1.52
NPAS4Q8IUM7 RNU6-173P-201ENST00000364215 104 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms