Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-413P-201ENST00000384115 107 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 DHFRP6-201ENST00000401776 268 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 U3.42-201ENST00000408746 214 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC068533.2-201ENST00000411872 306 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 Z99755.1-201ENST00000414048 380 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AL356968.1-201ENST00000416622 474 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC069157.1-201ENST00000421749 137 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 BX890604.2-201ENST00000427883 474 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC092641.1-201ENST00000440229 772 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 RPL23AP76-201ENST00000441860 458 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 MTCO2P25-201ENST00000447065 681 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AL353691.1-201ENST00000451332 387 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC097262.1-201ENST00000452559 548 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 FCF1P6-201ENST00000456841 595 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 RN7SL330P-201ENST00000469709 307 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC011979.1-201ENST00000472300 483 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AP001207.2-201ENST00000519490 539 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC021451.1-201ENST00000523498 1129 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 MIR1254-2-201ENST00000579553 63 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 MIR3922-201ENST00000585192 84 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 CCDC58P3-201ENST00000590792 430 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC004853.1-201ENST00000604902 698 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 SNORA51-201ENST00000606420 132 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AP002826.1-201ENST00000608835 315 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AL121652.1-201ENST00000608851 448 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AL513185.3-201ENST00000433335 1300 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 AC017071.1-201ENST00000564407 2204 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC090740.1-201ENST00000623193 2262 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 CUL1P1-201ENST00000509510 2425 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RNU4-35P-201ENST00000362588 141 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 MIR135A2-201ENST00000384854 100 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 MIR493-201ENST00000385254 89 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL031679.1-201ENST00000400616 525 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RSL24D1P1-201ENST00000404972 493 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 FAT1P1-201ENST00000406588 507 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RNA5SP293-201ENST00000410527 113 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 VN1R51P-201ENST00000411675 945 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 SSXP9-201ENST00000417503 292 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC245291.1-201ENST00000419501 328 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 MTCO2P5-201ENST00000422621 426 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 ATP5JP1-201ENST00000431631 322 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 ISCA1P2-201ENST00000438679 421 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 SDCBPP1-201ENST00000440192 890 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RPL18AP17-201ENST00000455326 198 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 snoU109.3-201ENST00000459477 145 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AP002812.1-201ENST00000495378 474 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 VN1R104P-201ENST00000505115 1009 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC113420.1-201ENST00000507903 571 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 XKRY-201ENST00000510392 1100 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC008837.2-201ENST00000513076 418 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 RN7SKP157-201ENST00000516174 282 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC006518.1-201ENST00000541449 943 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AADACP1-206ENST00000561502 1193 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC055876.1-202ENST00000567053 138 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 OR4K8P-201ENST00000578842 1048 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC015688.2-201ENST00000584523 262 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 BNIP3P26-201ENST00000600827 554 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC013444.2-201ENST00000603317 787 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms